Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13m09
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 116 2e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 116 2e-26
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 116 2e-26
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 116 2e-26
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 71 1e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 1e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 56 2e-08
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 56 2e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 0.001
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 40 0.002
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 39 0.004
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 39 0.004
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 38 0.009
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.011
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.080
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.11
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.18
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 32 0.32
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 32 0.32
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 31 0.56
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 31 0.56
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.99
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 30 1.7
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 30 1.7
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 30 1.7
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical ... 29 3.0
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 29 4.0
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 5.3
Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81553-3|CAB04493.1| 136|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical p... 28 6.9
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 28 6.9
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 9.2
AC006769-8|AAF60581.1| 431|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006645-1|AAF39843.1| 418|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 61 IQKESTLHLVL 71
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 61 IQKESTLHLVL 71
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 137 IQKESTLHLVL 147
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 213 IQKESTLHLVL 223
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 289 IQKESTLHLVL 299
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 365 IQKESTLHLVL 375
Score = 113 bits (272), Expect = 1e-25
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 441 IQKESTLHLVL 451
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 597
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 61 IQKESTLHLVL 71
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 137 IQKESTLHLVL 147
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 213 IQKESTLHLVL 223
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 289 IQKESTLHLVL 299
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 365 IQKESTLHLVL 375
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 517 IQKESTLHLVL 527
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 593 IQKESTLHLVL 603
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 669 IQKESTLHLVL 679
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 745 IQKESTLHLVL 755
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 821 IQKESTLHLVL 831
Score = 113 bits (272), Expect = 1e-25
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 441 IQKESTLHLVL 451
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 61 IQKESTLHLVL 71
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 137 IQKESTLHLVL 147
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 213 IQKESTLHLVL 223
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 289 IQKESTLHLVL 299
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 365 IQKESTLHLVL 375
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 441 IQKESTLHLVL 451
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 517 IQKESTLHLVL 527
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 593 IQKESTLHLVL 603
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 669 IQKESTLHLVL 679
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 745 IQKESTLHLVL 755
Score = 114 bits (275), Expect = 5e-26
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 637 IQKESTLHMVL 669
IQK+STLH+VL
Sbjct: 821 IQKQSTLHLVL 831
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 116 bits (278), Expect = 2e-26
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 637 IQKESTLHMVL 669
IQKESTLH+VL
Sbjct: 61 IQKESTLHLVL 71
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 636
M I +KTLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 637 IQKESTLHMVL 669
+ S LH+VL
Sbjct: 61 VLGGSVLHLVL 71
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +1
Query: 454 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 633
K+ + +KTL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 634 NIQKESTLHMV 666
NI+ E +H+V
Sbjct: 220 NIRDEDIIHLV 230
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 478 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 657
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 658 HM 663
+
Sbjct: 152 RL 153
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 409 RAHSQQPLSFIS-NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 564
R S+ P IS +S M + +KT TGKTIT E ++K ++ DK+GV
Sbjct: 42 RISSKLPEDQISVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 567
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +1
Query: 463 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 642
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 643 KESTLHMVL 669
E+T+++ L
Sbjct: 57 SEATIYVNL 65
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +1
Query: 463 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 642
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 643 KESTLHMVL 669
E+T+++ L
Sbjct: 57 SEATIYVNL 65
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 54.0 bits (124), Expect = 9e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 454 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 633
+ QIF+K L G + + +TV D+K I + +P L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 634 NIQKESTLHM 663
NIQK ST+ M
Sbjct: 212 NIQKSSTITM 221
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 463 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 600
+F+KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 487 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHM 663
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ + M
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +1
Query: 478 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 657
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 658 HM 663
++
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +1
Query: 478 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 657
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 658 HM 663
++
Sbjct: 644 YL 645
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 433 SFISNSVK-MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQ 603
SFI+N + + + +TLT E +T+A++K +A ++G + Q+LI+ GK
Sbjct: 43 SFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKI 102
Query: 604 LEDSKTMADYNIQKESTLHMVL 669
L+DS + + + ++L
Sbjct: 103 LDDSVKVGEVGFDSSKFVVVML 124
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 514 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 657
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.080
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 475 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 633
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 514 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 645
++T+ +K +I V + R++ GK LED ++A YNIQ+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 514 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 657
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -1
Query: 458 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGR 297
+F LLLI D+G + L +++ A DT+T +Y + +DF R +L G+
Sbjct: 11 LFKLLLIGDSGVGKSCL------LLRFADDTYTESYISTIGVDFKIRTIELDGK 58
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -1
Query: 458 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGR 297
+F LLLI D+G + L +++ A DT+T +Y + +DF R +L G+
Sbjct: 11 LFKLLLIGDSGVGKSCL------LLRFADDTYTESYISTIGVDFKIRTIELDGK 58
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -1
Query: 458 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 288
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -1
Query: 458 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 288
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 385 TIPPSVEARAHSQQPLSFISNS-VKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEG 561
T+PP EA ++ P++ S + V M + +T T+T++TEP +T + ++I +
Sbjct: 723 TVPPKTEA-PRTEVPMTGPSRTEVPMTVTPETGLSSTVTSKTEPPKTTTE--KRITPRTE 779
Query: 562 VP 567
VP
Sbjct: 780 VP 781
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 326 GNQLPLKGNNSWCGYRPPVAQFHHRWR 406
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 326 GNQLPLKGNNSWCGYRPPVAQFHHRWR 406
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 326 GNQLPLKGNNSWCGYRPPVAQFHHRWR 406
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 469 IKTLTGKTITAETEPAETVADLKQKIADKEGVPV 570
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical
protein ZC328.5 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 424 QPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ 603
+P F+ N IF L G T+T +T + +A+ K+K+ +G + IF
Sbjct: 109 RPTDFVKNGGMPLIFKLYLNG-TVTCDTATIDELANTKEKMYYPDGGSYWLFKSIFDNYS 167
Query: 604 LEDSKTMADYNIQKESTLHMVL 669
L Y +K S L +L
Sbjct: 168 LSVKDPAMGYKRRKRSILSWLL 189
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 633
M + IKT TGK IT E + +K ++ DK+GV G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 634 NIQK 645
IQ+
Sbjct: 56 KIQE 59
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 262 NITPGHLGEVIDAMGQQGRLLPEIIEADDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRL 83
++ PG +G ++D +GQ + E D ++ + ++ V++L +L + + F C +
Sbjct: 12 SVRPGWMGGLVDGLGQSEGIWNETTTKKDG-RIQKKKSSQLDFVDFLLYLFHAR-FLCSM 69
Query: 82 C 80
C
Sbjct: 70 C 70
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 457 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 633
M + IKT TGKTIT E + +K ++ K+GV AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 634 NIQK 645
IQ+
Sbjct: 56 KIQE 59
>Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical
protein F09B12.2 protein.
Length = 295
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 179 VSFYNFWQQSALLPHCIDHLAQVARCYIKSFESIYRFLHVGLIIFDY 319
+ F N WQ ++PH +I + SIY+FLHV L +F +
Sbjct: 178 IGFGNIWQ--VVIPHL---------AWIAGYISIYQFLHVLLFVFTF 213
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 119 IQIFDSFAAEIARLIHFKIVVSFYNFWQQSALLPHCIDHLAQVARCYIKSFESIYRFLHV 298
+QIF S E+AR ++ K VV F AL+P+ ++H+ I +E + H
Sbjct: 584 VQIFTSDETEMARNLNRKAVVEFLKSECPDALIPY-LEHV-------IFKWEEPSSYFHE 635
Query: 299 GLIIFDYGRGNQL 337
L+ F R N L
Sbjct: 636 TLLEFYVARVNTL 648
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 119 IQIFDSFAAEIARLIHFKIVVSFYNFWQQSALLPHCIDHLAQVARCYIKSFESIYRFLHV 298
+QIF S E+AR ++ K VV F AL+P+ ++H+ I +E + H
Sbjct: 584 VQIFTSDETEMARNLNRKAVVEFLKSECPDALIPY-LEHV-------IFKWEEPSSYFHE 635
Query: 299 GLIIFDYGRGNQL 337
L+ F R N L
Sbjct: 636 TLLEFYVARVNTL 648
>Z81553-3|CAB04493.1| 136|Caenorhabditis elegans Hypothetical
protein F56H6.3 protein.
Length = 136
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 104 IVFQKIQIFDSFAAEIARLIHFKIVVSFYNFWQQSALLPHCIDHLAQVARCYIKSFE 274
+ F KIQ F SF + + HFKI++ + F SA +P + L + + +F+
Sbjct: 9 LFFWKIQFFRSFISAFLEISHFKILL--FRF---SAFVPFSVVKLPVFCQIFSHNFQ 60
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 418 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 281
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical
protein E02C12.10 protein.
Length = 665
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 146 EIARLIHFKIVVSFYNFWQQSALLPHCIDHLAQV 247
+I+ L+ FK+V++ + WQ + L HC+D +
Sbjct: 256 KISELLGFKLVLNHGDLWQSNML--HCLDEFGNL 287
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 418 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 281
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 376 RPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKRLNITPGHLGEVIDAMGQQGRLL 200
+P+ P+I ++Q + +NY+ +Q DA +RL L ++ A Q +L
Sbjct: 460 KPVEKPKIATVQESKFVSVAAQNYRKQIQ---DAKERLTKEKSILSTLVQAQNQHNIIL 515
>AC006769-8|AAF60581.1| 431|Caenorhabditis elegans Hypothetical
protein Y45G12C.4 protein.
Length = 431
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 143 AEIARLIHFKIVVSFYNFWQQSALLPHCID 232
++++ L+ FK+V++ + WQ + L HC+D
Sbjct: 269 SKVSELLGFKLVLNHGDLWQSNML--HCLD 296
>AC006645-1|AAF39843.1| 418|Caenorhabditis elegans Hypothetical
protein F56A4.5 protein.
Length = 418
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 143 AEIARLIHFKIVVSFYNFWQQSALLPHCID 232
++++ L+ FK+V++ + WQ + L HC+D
Sbjct: 256 SKVSELLGFKLVLNHGDLWQSNML--HCLD 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,882,364
Number of Sequences: 27780
Number of extensions: 379713
Number of successful extensions: 1172
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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