Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13m02
         (218 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M58285-1|AAA35964.1|  613|Homo sapiens membrane-associated prote...    28   6.2  
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ...    28   6.2  
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ...    28   6.2  
BC084547-1|AAH84547.1|  712|Homo sapiens NCKAP1L protein protein.      28   6.2  
BC064997-1|AAH64997.1|  837|Homo sapiens NCKAP1L protein protein.      28   6.2  
BC001604-1|AAH01604.3|  865|Homo sapiens NCKAP1L protein protein.      28   6.2  

>M58285-1|AAA35964.1|  613|Homo sapiens membrane-associated protein
           HEM-1 protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 404 RAMAQEGLREVFSSHCPFLMGPIECL 429


>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
           1-like protein.
          Length = 1127

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 918 RAMAQEGLREVFSSHCPFLMGPIECL 943


>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
           1-like protein.
          Length = 1127

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 918 RAMAQEGLREVFSSHCPFLMGPIECL 943


>BC084547-1|AAH84547.1|  712|Homo sapiens NCKAP1L protein protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 503 RAMAQEGLREVFSSHCPFLMGPIECL 528


>BC064997-1|AAH64997.1|  837|Homo sapiens NCKAP1L protein protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 628 RAMAQEGLREVFSSHCPFLMGPIECL 653


>BC001604-1|AAH01604.3|  865|Homo sapiens NCKAP1L protein protein.
          Length = 865

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +2

Query: 86  RLLSQNGWRH---SNCPY*LGPIKCL 154
           R ++Q G R    S+CP+ +GPI+CL
Sbjct: 656 RAMAQEGLREVFSSHCPFLMGPIECL 681


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,073,167
Number of Sequences: 237096
Number of extensions: 466014
Number of successful extensions: 574
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)