Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13l22
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 66 3e-12
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 33 0.028
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.037
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 33 0.037
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.11
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 31 0.11
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.20
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 30 0.26
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 30 0.35
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 30 0.35
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 29 0.46
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 29 0.61
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 29 0.61
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 29 0.81
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.81
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 1.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.1
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.1
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 1.4
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 27 2.5
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 27 2.5
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 27 3.3
SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein Nnf1|Schizosacch... 26 4.3
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 26 4.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 4.3
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 5.7
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 5.7
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.7
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 26 5.7
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 5.7
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 26 5.7
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 26 5.7
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 25 7.5
SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c... 25 7.5
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 25 7.5
SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 7.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 7.5
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 25 7.5
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.9
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 25 9.9
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 25 9.9
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 66.5 bits (155), Expect = 3e-12
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 226 MDEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDE--KTKHELEDLMADVKKTAN 399
M EFF E++ IR+ I +I+ NV ++ H L T LE +D ++
Sbjct: 18 MGEFFEEIDHIRDAIRQIEDNVGRIEMLHQQSLQEIDEANIAATTRHLEGYTSDTRRLQT 77
Query: 400 KVRGKLKHIEQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKS 579
V+ ++ +E Q N D RKTQ + +KF++ + + + + YR + +
Sbjct: 78 SVQLAIRSLESQNMQLPPDN----DTATRKTQTEAVKKKFMDQIRHFLQIEKTYRAQYEQ 133
Query: 580 RIQRQLEITG-RATTDDELEEMLEQGNSAVF 669
R++RQLEI RAT DD + E+ VF
Sbjct: 134 RMRRQLEIANPRATEDDFQTAINEENGGQVF 164
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 33.5 bits (73), Expect = 0.028
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 214 EGGFMDEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAP-QSDEKTKHELEDLMADVKK 390
+G + D+ VE ++E + ++ + VK + A + ++ T EDL +
Sbjct: 399 QGDWRDQL-DHVEFLQEHLGPLEVELASVKVLYDNCFQAGIEENDYTMFSYEDLEHEFGI 457
Query: 391 TANKVRGKLKHIEQNIEQEEHSNKSSADL 477
TAN + K+K++E + + E S +L
Sbjct: 458 TANIIANKIKYLENELLEREKRTLSKQEL 486
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 33.1 bits (72), Expect = 0.037
Identities = 26/120 (21%), Positives = 56/120 (46%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLK 420
+E++ +++ DK+ + + +KK + SA + L+ A V N+ + K
Sbjct: 76 NEIDRLKKEGDKVSILLMQERKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAK 135
Query: 421 HIEQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKSRIQRQLE 600
EQ I++E + DL + + Q L + +E TE ++T+ ++ K ++ + E
Sbjct: 136 E-EQKIQEE--FERQITDL-LEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYE 191
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 33.1 bits (72), Expect = 0.037
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +1
Query: 418 KHIEQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKSRIQRQL 597
KH +N+ EE+ K S + R RK + ++ E E R Q + D +++Q++L
Sbjct: 47 KHFYKNVRPEEYIKKGSGE-RKRKFSKKSHLQELYERSEEKRRIQQEKED---AKVQKRL 102
Query: 598 EITGRATTDDELEEMLEQ 651
EI + ++ ML +
Sbjct: 103 EIEKKQKDREQTRNMLSK 120
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/117 (17%), Positives = 53/117 (45%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLK 420
SE+ +++ + +VE+ KK+ S + + ELE + + K+ ++++ +++
Sbjct: 716 SEISLLKDKYTVVSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVE 775
Query: 421 HIEQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKSRIQR 591
+E+ I +D+ H T ++ F + E+ + ++ +R QR
Sbjct: 776 KVEEKIFSGFCKRIGISDIHTYDEIHRTFTQSFTQKQLEFTKQKSLLENRISFEKQR 832
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 31.5 bits (68), Expect = 0.11
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Frame = +1
Query: 244 EVEEIREMID------KIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKV 405
E+E + ++D +I + + +V K A +D + E + KK +
Sbjct: 301 EIETTKRVVDEDTSNARISSRILDVFKTPGATYPFASNDPLMNY-FEQFTENAKKRTDLY 359
Query: 406 RGKLKHIEQNIEQEE---HSNKSSADLRIRKTQHS---TLSRKFVEVMTEYNRTQTD 558
+ +EQ++EQ E +N A L+ K +H LS +F +V E R Q +
Sbjct: 360 AATIGELEQHLEQVETTPQNNSPEALLKTIKEEHKLFMALSNRFAQVHDEVKRLQVN 416
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 30.7 bits (66), Expect = 0.20
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Frame = +1
Query: 259 REMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELE-------DLMADVKKTANKVRGKL 417
+E IDK + E+K K+ + ++ +HELE D ++ ++ K
Sbjct: 513 QEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTERELRLLQEKA 572
Query: 418 KHIEQNIEQEEHSNKSSADLRIRKTQHSTLS--RKFVEVMTEYNRTQTDYRDRCKSRIQR 591
+E+N E + S + + + + S R+ + E T+ YR + + +
Sbjct: 573 ASLERNKSSEVSNLLSRYNTEVAHLEDALHSKDRELANLGVELKSTENRYRQLLQEK-EE 631
Query: 592 QLEITGRATTDDELEEM 642
+LEI +A D+ L ++
Sbjct: 632 ELEIQ-KAAVDESLLQL 647
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 30.3 bits (65), Expect = 0.26
Identities = 21/108 (19%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +1
Query: 256 IREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVR---GKLKHI 426
+ M K+ EE+ K ++ ++ + ++ + +KK +K++ +L+H+
Sbjct: 380 LSNMSQKLSRVNEELVLKTKIATASSNANTDLRSRVDISESKLKKRDDKLKRVSSQLEHL 439
Query: 427 EQNIEQEEHSNKS-SADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRD 567
+ N E+E+ N++ ++ + Q++T S + V + + N RD
Sbjct: 440 KHNYEEEKSMNENLLVRIQTLEKQNTTKSDQIVSMQFQINDLNEQLRD 487
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.35
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Frame = +1
Query: 232 EFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLM--ADVKKTANKV 405
E ++E R+ DK + E+ +++ + + D+K K+ L L+ A +K N+
Sbjct: 160 EACDDLESARQKNDKYR---EQKTQRNLKLSESDMLDKKNKYLLRMLVYNAHKQKFYNET 216
Query: 406 RGKLKHIEQNIEQEEHSNKSSA---DLRIRKTQHSTLSRKFVEVMTEYNRTQ 552
L + Q + + SN + I K+ H TLS++ VE+ +E + +
Sbjct: 217 LPTLLNHMQVLNEYRVSNLNEIWCNSFSIEKSLHDTLSQRTVEIQSEIAKNE 268
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 262 EMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIE 441
E + + + ++ KK+ L+A + +EK EL +M K+ K+ KLK+ +N +
Sbjct: 527 EYVKQNSKSAKKTKKRQRDTLTAEEKEEKEAKELSKMMMSNKQ--RKLYSKLKN--ENSK 582
Query: 442 QEEHSN 459
E ++N
Sbjct: 583 NENYNN 588
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 29.5 bits (63), Expect = 0.46
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +1
Query: 337 SDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIEQEEHSNK-SSADLRIRKTQHSTLS- 510
SD +T+ L DL + ++ ++R K N E++S+K SS +L +RK S
Sbjct: 171 SDPETER-LNDLR-EREEFEERLRRKDLEAATNEFVEDYSSKFSSEELALRKLADDPESW 228
Query: 511 RKFVEVMTEYNRTQTDYRDRCKSRIQRQLEITGRATTDDE 630
RK + + +R Q K R Q+QLEI R D+E
Sbjct: 229 RKLASELRKKSRQQY-----LKPRAQQQLEILRREIRDEE 263
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +1
Query: 385 KKTANKVRGKLKHIEQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYR 564
K+ K+R KLK + ++E+ + +SSA + L+ + ++++E+ + YR
Sbjct: 632 KEDMKKIRKKLKDYNRLFDEEDIAEQSSA--------NRELAARRRQLISEWQK----YR 679
Query: 565 DRCKSRIQRQLEITGR--ATTDDELEEMLEQ 651
D +R+ + ITG+ T E EE++++
Sbjct: 680 DEVIARVAEERAITGQPAITVPAEEEEIIQE 710
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Frame = +1
Query: 232 EFFS-EVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVR 408
EF+ E+E +RE ++K+QA +E S + + ++ T ++ +++ +
Sbjct: 327 EFYEIEIEVLREKVEKLQALSDEKDFYISKLEKSLDRNDTTPVPSDEKLSNYAAEKENLV 386
Query: 409 GKLKHIEQNIEQ----EEHSNK--SSADLRIRKTQ 495
++ +E IEQ E N+ S A+ + TQ
Sbjct: 387 SRISELEHTIEQLTINNERDNERMSPAEFELETTQ 421
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 28.7 bits (61), Expect = 0.81
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +1
Query: 253 EIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQ 432
++R D+I+ E+K ++ + S S T E+E L + + + K++GK+
Sbjct: 199 QVRTEYDRIRMEASELKIRYHNVDSLMAS---TLEEIEKLQSSIVHSPEKLKGKIADTSL 255
Query: 433 NIEQEEHSNKSSADLRIRKTQHSTLS 510
I Q + S + D + K H+ L+
Sbjct: 256 RI-QNDRSQQVELDKK-SKILHTKLN 279
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.7 bits (61), Expect = 0.81
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELED----LMADVKKTANKVR 408
+E+E++ + I+K + + KKK + S S +ELE L AD+++ A K R
Sbjct: 873 NELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNELESEYEKLEADIQEMAQKSR 932
Query: 409 GKLKHIEQNIEQEEHSNKSSADLRI 483
++ +E N E N+ +++LRI
Sbjct: 933 TEI--LEAN-EYLHQLNEWNSELRI 954
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLK 420
SE E E + ++ VE KKK A +SD ++ E E+ ++ +
Sbjct: 51 SESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESES 110
Query: 421 HIEQNIEQEEHSNKSS 468
E E+E S + S
Sbjct: 111 ESESESEEESESEEES 126
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 1.1
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 13/142 (9%)
Frame = +1
Query: 244 EVEEIREMIDKIQANVEEVKKKHSAIL--SAPQSDEKTKHELEDLMADVKKTANKVRGK- 414
E E ++M +++ V EV++ L + Q E T +LE + +KK ++ K
Sbjct: 452 EYEIRQQMTREMEERVSEVERTFLTKLLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKT 511
Query: 415 --LKHIEQNIEQ--------EEHSNKSSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYR 564
+ +EQ IE+ EE S K S+ + + QH SRK + + Q +
Sbjct: 512 ETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQHKRSSRKL--LYEDKQAIQEAHT 569
Query: 565 DRCKSRIQRQLEITGRATTDDE 630
K ++ Q + +DDE
Sbjct: 570 INTKRKLWPQSTLIQAPNSDDE 591
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 244 EVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKK----TANKVRG 411
EVE +R+ +DK + VE +K +AI + EK+ E + L D+++ T K+
Sbjct: 146 EVENLRKELDKYKDLVETEAEKRAAI--TKEECEKSWLEQQKLYKDMEQENASTIQKLTS 203
Query: 412 KLKHIEQNIEQEEHSNKSS 468
K++ ++ + Q +H ++S
Sbjct: 204 KIRELQAS--QLDHDLQAS 220
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 253 EIREMIDKIQANVEEVKKKHSAILSAPQSD-EKTKHELEDLMADVKKTANKVRGKLKHIE 429
+I+E I+ + V+++ +K +I + D K K ELE+L + + + RG+ +
Sbjct: 46 QIQE-IEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTASYRNRGERSELA 104
Query: 430 QNIEQEEH 453
+ Q H
Sbjct: 105 ASNNQVTH 112
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 277 IQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIEQEEHS 456
I ++ +V +HS + SA D T + + + +K +NKV LK I + S
Sbjct: 58 ITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKVSSALK---LTIPKRWRS 114
Query: 457 NKSSA 471
+KSS+
Sbjct: 115 SKSSS 119
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 EFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKH-ELEDLMADVKKT 393
+F S+ E R +++ Q VEE K K + L + T H E +L D KK+
Sbjct: 28 KFLSKAERARLALERRQKEVEEAKAKQNDKLLDLRKRTFTNHLENNELADDEKKS 82
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 3.3
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Frame = +1
Query: 268 IDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLM-ADVKKTANKVRGK---LKHIEQN 435
ID I N+E+ K + + A +DE + E +D A+ + GK K E+
Sbjct: 76 IDAIYQNIEKTTNKPAQLWKAVGNDEVVESEQQDSHDAESIPQFGLLTGKQVTFKAEERR 135
Query: 436 IEQEEHSNKSSADLR-IRKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKSRIQRQLE 600
+E+ SN +LR R+T + + + ++++ + +++ + +RQ E
Sbjct: 136 KREEKSSNLDEEELRKSRETVYRDATGRRIDLVLARKEAKRKLKEK-EEEARRQKE 190
>SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein
Nnf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 259 REMIDKIQANVEEVKKKHSAILSAPQSDEK-TKHELEDLMADVKKTANKVRGKLKHIEQN 435
RE++DK+ ++ ++ K++ + + ++EK T+ + + + ++K V G E+N
Sbjct: 114 RELLDKLNQDLLDIDKENEGLSTQIAAEEKATEDCISRMQSLIQKLEKTVYGM---NEKN 170
Query: 436 IEQEEH 453
+ +E H
Sbjct: 171 LAKEAH 176
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 265 MIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIEQ 444
++ + +VEE+K+ S + ++K+KHE + D K +A+K R K +++ +
Sbjct: 47 LLKMAKRSVEELKRSADEEASVKRKEKKSKHEHKKHKKD-KPSADKDRISKKDKKKSKKG 105
Query: 445 EEHSNKSSADL 477
+ + + S ++
Sbjct: 106 KSKTKEESIEI 116
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 399 QSQRKIKTYRTEHRTRGALEQIVGRSQDKKDPTFNSLP*VRRGDDRVQPHADRLQR 566
Q + KIK+ T + L + R+ + +D S+ +RR DDR + + +L++
Sbjct: 1659 QKECKIKS-NTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDRCEHLSGKLKK 1713
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 214 EGGFMDEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHE 360
E F D+F E EE+ E +++ + + H A D K+ ++
Sbjct: 183 EQEFYDDFEDEEEEVEEQVEEEYEPIIDFVLNHRKRADAQDDDPKSSYQ 231
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 229 DEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSD--EKTKHELEDLMADVKKTANK 402
D+ F E E+ID++ + V ++K+ + + + QSD + H L + +T
Sbjct: 62 DKRFERGSEADELIDQLLSRVSMLEKRLNEVGTKSQSDYENQQSHNLPSTPSADAETQRN 121
Query: 403 VRGKLKHIEQNIEQEEHSNKSS 468
+ G L ++ Q + + SS
Sbjct: 122 I-GSLSVLDDTKSQYANYSSSS 142
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 593 NSRSRAAPPPTMNSRKCSNKATR 661
NSR R +P P + + CS+++ R
Sbjct: 204 NSRYRGSPKPNIEKQSCSSESDR 226
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 581 GYRDNSRSRAAPPPTMNSRKCSNKA 655
GY D+S S AAP P SRK S+ +
Sbjct: 262 GYSDHSVSVAAPIPKKESRKESSNS 286
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 5.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 220 GFMDEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKH 357
G +DE E ++E IDK+ +E+V+ + L + S EK ++
Sbjct: 215 GRLDELMCENTALKEKIDKLNKELEKVEPQ-LTFLRSKNSIEKPRN 259
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 325 SAPQSDEKTKHELEDLMADVKKTANKVRGK 414
S P +D+K K + +D ++K ++NK K
Sbjct: 85 SLPSTDKKKKKDNDDFKQNLKSSSNKTEEK 114
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.8 bits (54), Expect = 5.7
Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +1
Query: 223 FMDEFFSEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHE---LEDLMADVKKT 393
F D++ EE + + + ++ + +++K I +SD HE L++ +
Sbjct: 190 FKDDYEKIKEENKRLYKERKSFLSKIEKSACEIHDLKESDSFKDHEILRLKEERTAAMQA 249
Query: 394 ANKVRGKLKHIEQNIEQEEHSNKSSA-DLRIRKTQHSTLSRKFVEVMTEYNRTQTD 558
+ + G ++ I+ + + E NK ++ + L ++ +Y+R Q D
Sbjct: 250 IDDISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQELYAFEDDYSRIQND 305
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 VEEVKKKHSAILSAPQSDEKTKHELEDLMADV-KKTANKVRG 411
+ E KH I D+K K +L++DV KK N+V G
Sbjct: 299 INECGIKHDGIEGVAIHDQKEKELSSNLVSDVAKKIINEVTG 340
>SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 427 EQNIEQEEHSNKSSADLRIRKTQHSTLSRKFVEVMTE 537
E++ E EE+ + + + K H+T+ R F E MTE
Sbjct: 24 EKHFEAEEYRDSFLSQENMNKINHTTIERLFRE-MTE 59
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 484 RKTQHSTLSRKFVEVMTEYNRTQTDYRDRCKSRIQR---QLEITGRATTDDE 630
+KT+H KFV+++ E+ + +Y +R K+++ R + T A T DE
Sbjct: 196 KKTRHDYPRDKFVDIVWEW---KEEYHNRIKNQMSRLGGSFDWTREAFTMDE 244
>SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 318 GTVLFLHFFDVRLNLVYHLSYFFNLTEEF 232
GT LHF +RL L+ LS+F++ E+F
Sbjct: 33 GTYRNLHFRGLRLLLLQCLSHFWDHDEKF 61
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELE 366
S++ +++E DK+ A EE +K +I A E+ + ELE
Sbjct: 379 SKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELE 420
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 25.4 bits (53), Expect = 7.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 241 SEVEEIREMIDKIQANVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLK 420
SE+EE +E I K +A ++ + + SD++++HE + K K R +
Sbjct: 222 SELEE-KERIQK-KAFEDKGLVSDQDVNHSIDSDDQSEHEQAETPIPSSKNKRKTRSQRN 279
Query: 421 HIEQNIEQE 447
I Q E+E
Sbjct: 280 KIRQRREEE 288
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 9.9
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = +1
Query: 355 HELEDLMADVKKTANKVR----GKLKHIEQNIEQEEHSNKSSADLRIRKTQHSTLSRK-F 519
H+ D++ V ++R G+ K + +HS K + DL+ + T S K
Sbjct: 90 HKASDIVDAVSSKDEELRKHAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGS 149
Query: 520 VEVMTEYNRTQTDYRDRCKSRIQRQLEITGRATTDDELEEM 642
V +E +R + I++ L+++ T + E+
Sbjct: 150 VNNKSERSREAKSRMPKNSKEIKKGLDLSKLDMTSRMIVEL 190
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 572 ARAGYRDNSRSRAAPPPTMNSRKCSNKATRPF 667
+ G R+ + AAPPP + RK TRP+
Sbjct: 361 SNTGLRNRTSPTAAPPPP-SRRKTGGLNTRPY 391
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/49 (22%), Positives = 23/49 (46%)
Frame = +1
Query: 286 NVEEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQ 432
NVE KK++ + P+ EK + +D K+ ++ + +E+
Sbjct: 19 NVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSVSPVEE 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,154,390
Number of Sequences: 5004
Number of extensions: 37127
Number of successful extensions: 184
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -