Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13l12
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 31 2.0
U26445-1|AAA82046.1| 409|Drosophila melanogaster dShc protein. 30 2.6
BT011015-1|AAR30175.1| 409|Drosophila melanogaster RH57813p pro... 30 2.6
AJ271817-2|CAB72250.1| 409|Drosophila melanogaster dShc protein... 30 2.6
AE014296-1653|AAF50273.1| 409|Drosophila melanogaster CG3715-PA... 30 2.6
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 29 4.5
AF214523-1|AAF24502.1| 809|Drosophila melanogaster SP460 protein. 29 6.0
AY069648-1|AAL39793.1| 238|Drosophila melanogaster LD41421p pro... 29 7.9
AE014298-1660|AAF48075.1| 201|Drosophila melanogaster CG2371-PC... 29 7.9
AE014298-1659|AAF48074.1| 201|Drosophila melanogaster CG2371-PA... 29 7.9
AE014298-1658|AAF48073.1| 238|Drosophila melanogaster CG2371-PB... 29 7.9
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 242 IAQKRIILTLCLCNDCTFCSHQYVSQLRALCICP 141
I + I ++ C +DC ++ +V Q +A+C CP
Sbjct: 21671 ICRNEICISPCAADDCGIGAYCHVQQRKAICRCP 21704
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 275 PTGCTQNEQCTAGYYCNTYTYVC 343
P CT N+QC +CN T C
Sbjct: 22564 PPECTSNDQCADNRFCNLDTKTC 22586
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 272 RPTGCTQNEQCTAGYYCNTYTYVCNKCINCQQGREFVMEN 391
+ GC+ C G C +Y N C+QG E EN
Sbjct: 872 KTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSEN 911
>U26445-1|AAA82046.1| 409|Drosophila melanogaster dShc protein.
Length = 409
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 242 LLRISTAFNVRPTGCTQNEQCTAGYYCNTYTYVCNKCIN 358
++ + AFNVR TGC + + T T + +CIN
Sbjct: 27 IMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECIN 65
>BT011015-1|AAR30175.1| 409|Drosophila melanogaster RH57813p
protein.
Length = 409
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 242 LLRISTAFNVRPTGCTQNEQCTAGYYCNTYTYVCNKCIN 358
++ + AFNVR TGC + + T T + +CIN
Sbjct: 27 IMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECIN 65
>AJ271817-2|CAB72250.1| 409|Drosophila melanogaster dShc protein
protein.
Length = 409
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 242 LLRISTAFNVRPTGCTQNEQCTAGYYCNTYTYVCNKCIN 358
++ + AFNVR TGC + + T T + +CIN
Sbjct: 27 IMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECIN 65
>AE014296-1653|AAF50273.1| 409|Drosophila melanogaster CG3715-PA
protein.
Length = 409
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 242 LLRISTAFNVRPTGCTQNEQCTAGYYCNTYTYVCNKCIN 358
++ + AFNVR TGC + + T T + +CIN
Sbjct: 27 IMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECIN 65
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 302 CTAGYYCNTYTYVCNKCINCQQGREFVME 388
C+ GY + C+K I+C G E +ME
Sbjct: 1626 CSTGYQYLPHPTNCHKYIHCSNGHELIME 1654
>AF214523-1|AAF24502.1| 809|Drosophila melanogaster SP460 protein.
Length = 809
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 275 PTGCTQNEQCTAGYYCNTYTYVC 343
P CT N+QC +CN T C
Sbjct: 358 PPECTSNDQCADNRFCNLDTKTC 380
>AY069648-1|AAL39793.1| 238|Drosophila melanogaster LD41421p
protein.
Length = 238
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 104 DQSINHIKMMNDTDKYTMHEVEKRIGVNRKYNHYINITLILFVFVQLLRISTAFNVRPT 280
D S N +YT+ E+E+ +GV R+ + L++ F +LR + F ++P+
Sbjct: 63 DSSTEENPTSNTEPEYTLEELERLVGVPRQ-----DFLLLIKTFSYILRRISTFIIKPS 116
>AE014298-1660|AAF48075.1| 201|Drosophila melanogaster CG2371-PC,
isoform C protein.
Length = 201
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 104 DQSINHIKMMNDTDKYTMHEVEKRIGVNRKYNHYINITLILFVFVQLLRISTAFNVRPT 280
D S N +YT+ E+E+ +GV R+ + L++ F +LR + F ++P+
Sbjct: 26 DSSTEENPTSNTEPEYTLEELERLVGVPRQ-----DFLLLIKTFSYILRRISTFIIKPS 79
>AE014298-1659|AAF48074.1| 201|Drosophila melanogaster CG2371-PA,
isoform A protein.
Length = 201
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 104 DQSINHIKMMNDTDKYTMHEVEKRIGVNRKYNHYINITLILFVFVQLLRISTAFNVRPT 280
D S N +YT+ E+E+ +GV R+ + L++ F +LR + F ++P+
Sbjct: 26 DSSTEENPTSNTEPEYTLEELERLVGVPRQ-----DFLLLIKTFSYILRRISTFIIKPS 79
>AE014298-1658|AAF48073.1| 238|Drosophila melanogaster CG2371-PB,
isoform B protein.
Length = 238
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 104 DQSINHIKMMNDTDKYTMHEVEKRIGVNRKYNHYINITLILFVFVQLLRISTAFNVRPT 280
D S N +YT+ E+E+ +GV R+ + L++ F +LR + F ++P+
Sbjct: 63 DSSTEENPTSNTEPEYTLEELERLVGVPRQ-----DFLLLIKTFSYILRRISTFIIKPS 116
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,679,747
Number of Sequences: 53049
Number of extensions: 635191
Number of successful extensions: 1891
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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