Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13l10
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075385-1|AAL68223.1|  413|Drosophila melanogaster LD23669p pro...    51   6e-07
AE013599-862|AAF58938.1|  413|Drosophila melanogaster CG8808-PA ...    51   6e-07
D88814-1|BAA13724.1|  413|Drosophila melanogaster DmPdk protein.       51   8e-07
AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-P...    28   4.7  

>AY075385-1|AAL68223.1|  413|Drosophila melanogaster LD23669p
           protein.
          Length = 413

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = +3

Query: 300 AGAIFTNVTKMLDFYSQFNPSPLSIKQFIDFG 395
           A +   ++ KMLDFYS FNPSPLSIKQF+DFG
Sbjct: 11  ASSSMASLAKMLDFYSGFNPSPLSIKQFMDFG 42


>AE013599-862|AAF58938.1|  413|Drosophila melanogaster CG8808-PA
           protein.
          Length = 413

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = +3

Query: 300 AGAIFTNVTKMLDFYSQFNPSPLSIKQFIDFG 395
           A +   ++ KMLDFYS FNPSPLSIKQF+DFG
Sbjct: 11  ASSSMASLAKMLDFYSGFNPSPLSIKQFMDFG 42


>D88814-1|BAA13724.1|  413|Drosophila melanogaster DmPdk protein.
          Length = 413

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
 Frame = +3

Query: 285 FKMRLAGAIFT--NVTKMLDFYSQFNPSPLSIKQFIDFG 395
           F +R + A  +  ++ KMLDFYS FNPSPLSIKQF+DFG
Sbjct: 4   FPVRFSAASLSMASLAKMLDFYSGFNPSPLSIKQFMDFG 42


>AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-PA
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 197 FSLVRIFVIYSAANYATTALNRLPNDIPL 111
           F++ RIF  Y   N+    LN +PNDIP+
Sbjct: 185 FAIQRIF--YRPINFHGKVLNAIPNDIPI 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,170,199
Number of Sequences: 53049
Number of extensions: 305405
Number of successful extensions: 713
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)