Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13l08
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11 pr...    30   6.6  
BC001726-1|AAH01726.2|  408|Homo sapiens NOL11 protein protein.        30   6.6  
AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.                  30   6.6  
AL110271-1|CAB53709.1|  314|Homo sapiens hypothetical protein pr...    30   6.6  
AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens ...    30   6.6  
AL591543-1|CAI17285.1|  992|Homo sapiens ankyrin repeat domain 1...    30   8.7  
AB095935-1|BAC23111.1|  996|Homo sapiens KIAA2015 protein protein.     30   8.7  

>BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11
           protein.
          Length = 719

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 RCTYICIFYPRVCLQRLYNFHILNCWRCP 236
           RC     FYPR CL +L   H+L+   CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471


>BC001726-1|AAH01726.2|  408|Homo sapiens NOL11 protein protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 RCTYICIFYPRVCLQRLYNFHILNCWRCP 236
           RC     FYPR CL +L   H+L+   CP
Sbjct: 132 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 160


>AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.
          Length = 719

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 RCTYICIFYPRVCLQRLYNFHILNCWRCP 236
           RC     FYPR CL +L   H+L+   CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471


>AL110271-1|CAB53709.1|  314|Homo sapiens hypothetical protein
           protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 RCTYICIFYPRVCLQRLYNFHILNCWRCP 236
           RC     FYPR CL +L   H+L+   CP
Sbjct: 38  RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 66


>AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13640 fis, clone PLACE1011221. ).
          Length = 719

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 RCTYICIFYPRVCLQRLYNFHILNCWRCP 236
           RC     FYPR CL +L   H+L+   CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471


>AL591543-1|CAI17285.1|  992|Homo sapiens ankyrin repeat domain 18A
           protein.
          Length = 992

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 436 IMKSKLPYAIELQEWLLEE-VIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNAL 612
           ++K +L YAI+      E+  I ++    + +   ++    N++++TK +A +++  N L
Sbjct: 336 MLKEEL-YAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDL 394

Query: 613 QAVVAQKTEELFKKQEFIERI 675
           +A  A+   EL K++   ER+
Sbjct: 395 KAENARLNSELEKEKHNKERL 415


>AB095935-1|BAC23111.1|  996|Homo sapiens KIAA2015 protein protein.
          Length = 996

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 436 IMKSKLPYAIELQEWLLEE-VIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNAL 612
           ++K +L YAI+      E+  I ++    + +   ++    N++++TK +A +++  N L
Sbjct: 340 MLKEEL-YAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDL 398

Query: 613 QAVVAQKTEELFKKQEFIERI 675
           +A  A+   EL K++   ER+
Sbjct: 399 KAENARLNSELEKEKHNKERL 419


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,031,409
Number of Sequences: 237096
Number of extensions: 1794600
Number of successful extensions: 5307
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5307
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)