Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13l06
(656 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.1
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 24 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.4
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 23 3.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 5.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 7.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 262 NHYDELL*P*LFTNTSHTQSHVHYAPSSDTSVVTALILTQV 140
N+Y L+ P FT+ + YA +T +T+L+LT+V
Sbjct: 626 NNYINLVRPNTFTDKVNLTRVDMYANMIETMELTSLLLTKV 666
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 543 LSATLLEGTFSSDVDNVVT 487
L A L+G F SD++ V T
Sbjct: 528 LEAIRLDGNFLSDINGVFT 546
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 278 SASLDYGTIYAVYLQ*SNSLDMD 346
+A + YGT++ +Y+Q S + +D
Sbjct: 125 AAFISYGTLFFIYVQPSATFSLD 147
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 359 FLKLDPCPNYLTTEGKQHILYHN 291
FL C + T+ K+H+L HN
Sbjct: 628 FLNNSMCTSTTTSPDKEHVLAHN 650
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 176 HKRRDRVDSYTGTSLVN 126
H RR R D YT LVN
Sbjct: 134 HYRRTRRDRYTNLGLVN 150
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 378 SLQPNMEKQNTKIRRRKIKSNHQ 446
S+Q + + +NT I+ R+ + NH+
Sbjct: 474 SIQSHAKAKNTMIKARQYRLNHK 496
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 378 SLQPNMEKQNTKIRRRKIKSNHQ 446
S+Q + + +NT I+ R+ + NH+
Sbjct: 474 SIQSHAKAKNTMIKARQYRLNHK 496
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 378 SLQPNMEKQNTKIRRRKIKSNHQ 446
S+Q + + +NT I+ R+ + NH+
Sbjct: 100 SIQSHAKAKNTMIKARQYRLNHK 122
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 455 DFHLVVRLDFSSSYFCVLFFHVWLETRWWQIH 360
DF L ++ Y + FHV L+ W Q H
Sbjct: 63 DFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSH 94
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 407 VLFFHVWLETRWWQIHFLKLDPCPNYL 327
+LF H W I F K P P +L
Sbjct: 484 LLFVHDTKNAGIWMIDFAKTLPLPQHL 510
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 407 VLFFHVWLETRWWQIHFLKLDPCPNYL 327
+LF H W I F K P P +L
Sbjct: 399 LLFVHDTKNAGIWMIDFAKTLPLPQHL 425
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 407 VLFFHVWLETRWWQIHFLKLDPCPNYL 327
+LF H W I F K P P +L
Sbjct: 718 LLFVHDTKNAGIWMIDFAKTLPLPQHL 744
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 369 PPPSLQPNMEKQNTKIRRRK 428
PPP P K++ + RRR+
Sbjct: 394 PPPRQTPPSRKESGRRRRRR 413
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,413
Number of Sequences: 438
Number of extensions: 4264
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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