Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13l02
(352 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 35 0.021
03_05_0932 + 28924891-28924935,28925982-28926062,28926464-289265... 30 0.59
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 29 1.4
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 28 2.4
06_03_0752 - 24171847-24174321 28 2.4
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 27 3.1
07_03_0200 - 15016084-15016342,15016814-15016869,15016963-150179... 27 3.1
07_03_0020 + 12512841-12512879,12512964-12513009,12513830-125139... 27 4.1
01_01_0225 - 1911820-1912929,1913345-1913893,1914010-1914024 27 4.1
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 27 5.5
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 27 5.5
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 27 5.5
07_03_0583 - 19684388-19684498,19685083-19685216,19685765-196858... 27 5.5
02_03_0203 + 16365262-16365644,16365774-16365869,16365991-163662... 27 5.5
01_07_0120 + 41185884-41186127,41187228-41187310,41188596-411886... 27 5.5
12_01_0878 - 8420348-8420580,8420728-8420890 26 7.2
03_05_0421 + 24065725-24066052,24066811-24067040 26 7.2
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 26 9.6
10_05_0086 + 9025410-9025730,9025974-9026008,9026194-9026279,902... 26 9.6
04_03_1017 + 21747044-21748051 26 9.6
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 34.7 bits (76), Expect = 0.021
Identities = 26/65 (40%), Positives = 29/65 (44%)
Frame = -2
Query: 195 PPGPVRPSLVNLHFPDSSGESILTPGLVRTSSQHGPLSASESRPQTILRTRPPSSRITGD 16
P PVRP L PD E TP +RT PLSA SRP L R S+
Sbjct: 322 PRAPVRP----LDIPDFPNE---TPPNLRTKLPERPLSAGRSRPGMALGVRSTSNTEPSA 374
Query: 15 ATLPV 1
A+ PV
Sbjct: 375 ASAPV 379
>03_05_0932 +
28924891-28924935,28925982-28926062,28926464-28926512,
28926599-28926677,28926762-28926921,28927307-28927440,
28927814-28927882,28928064-28928151,28928396-28928471,
28929267-28929340,28929478-28929585,28929858-28930160,
28930483-28930587,28930670-28930750,28930838-28931852,
28932086-28932201
Length = 860
Score = 29.9 bits (64), Expect = 0.59
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 198 FPPGPVRPSLVNLHFPDSSGESILTPGLVRTSSQHGPLSASESRP 64
FPP P ++ L D +L+PG V SS H +A P
Sbjct: 632 FPPAPTEQDVIVLSDSDDDNVMVLSPGDVNFSSAHDNGNAFPPNP 676
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -2
Query: 195 PPGPVRPSLVNLHFPDSSGESILTPGLVRTSSQHGPLSASESRPQTILRTRPPSSRI 25
PP P PSL LH P + L + P S S PQ LRT+ P ++
Sbjct: 997 PPPPPPPSLQQLHHPYQHQQQ-QQQQLYHHQNALQPQIPSNSIPQAYLRTQQPLQQL 1052
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 213 FWLLGFPPGPVRPSLVNL-HFPDSSGESILTP 121
F LG PPGP++P N+ H P G + P
Sbjct: 520 FGPLGLPPGPMQPIGPNMSHSPGPLGPGVFIP 551
>06_03_0752 - 24171847-24174321
Length = 824
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 57 WFEVGTHWR*VAHVDWTSALSLVLIWTP 140
WF HW+ VA L L+L+W P
Sbjct: 638 WFADVCHWKNVATTALVHVLLLILVWYP 665
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 30 GYSEVGYGGWFEVGTHWR*VAHVDWTSALSLVLIW 134
G+SE GYG WF+ W H + + IW
Sbjct: 862 GWSEEGYGYWFQTPEGWTIDGHYRSLIYMRPLAIW 896
>07_03_0200 -
15016084-15016342,15016814-15016869,15016963-15017960,
15018707-15018768,15019242-15019274,15019697-15019881,
15020033-15020133,15020783-15020795,15021216-15021319,
15021593-15021693,15022773-15022849,15022965-15023021,
15023158-15023268,15023803-15023859
Length = 737
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 30 GYSEVGYGGWFEVGTHWR*VAHVDWTSALSLVLIW 134
G+SE GYG WF+ W H + + IW
Sbjct: 645 GWSEEGYGYWFQTPEAWTIDGHYRSLIYMRPLAIW 679
>07_03_0020 +
12512841-12512879,12512964-12513009,12513830-12513954,
12514289-12514319,12514427-12514497,12514644-12514692,
12514780-12514880,12515594-12515722,12516076-12516120
Length = 211
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 1 DWERGVSCNSATRRSGTEDGLRS 69
+W +GV C+S T+R G ED RS
Sbjct: 58 NW-KGVRCDSHTKRRGKEDTCRS 79
>01_01_0225 - 1911820-1912929,1913345-1913893,1914010-1914024
Length = 557
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 31 ATRRSGTEDGLRSGLTGAEWPMLTGR 108
A R+G EDGLR + GA P +T R
Sbjct: 66 AAGRAGEEDGLRRAVAGALKPRVTYR 91
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 216 DFWLLGFPPGPVRPSLVNLHFPDSSGESILTPGLVRTSSQH-GPLSASESRPQTILRTRP 40
D + + P PV PS V+ S + L V+T + H P ++ RP++ TR
Sbjct: 261 DDYYMNRPLSPVSPSPVSRE--SSFQQETLVGVEVQTMNGHLYPKPLTQVRPESWQLTRR 318
Query: 39 PSSRITGDA 13
P+ + G+A
Sbjct: 319 PTEEVRGEA 327
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 104 DVRTKPGVNMDSPEESG 154
D +T+P + MD+PEESG
Sbjct: 127 DDKTEPLITMDTPEESG 143
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 104 DVRTKPGVNMDSPEESG 154
D +T+P + MD+PEESG
Sbjct: 127 DDKTEPLITMDTPEESG 143
>07_03_0583 -
19684388-19684498,19685083-19685216,19685765-19685888,
19685982-19686251,19686961-19687155,19687236-19687328,
19687411-19687539,19687646-19689277
Length = 895
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 22 CNSATRRSGTEDGLRSGLTGAEWPMLTG 105
CN RR+G ++ + L G W TG
Sbjct: 414 CNHHKRRNGEQESQQDSLVGITWSQETG 441
>02_03_0203 +
16365262-16365644,16365774-16365869,16365991-16366297,
16366417-16366664,16367201-16367438
Length = 423
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 258 APTPGRYPTTARCGDFWLLGFPPGPV-RPSLVNLHFPDSSGESILTPGLVRTSS 100
AP+ GR R G WLL F GPV PS P S S L P +V ++
Sbjct: 64 APSLGRVGWPRREGAAWLLSFRAGPVSSPSSAAAGDP-SQALSALLPLVVAATA 116
>01_07_0120 +
41185884-41186127,41187228-41187310,41188596-41188647,
41188729-41188854,41188967-41189049,41189308-41189490,
41189901-41190237,41190607-41190750,41190854-41190939,
41191069-41191113
Length = 460
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 107 RPVNMGHSAP-VSPDLKPSSVP 45
+PVN G+S V+P+L P+SVP
Sbjct: 283 QPVNQGNSIRGVNPELSPNSVP 304
>12_01_0878 - 8420348-8420580,8420728-8420890
Length = 131
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 34 TRRSGTEDGLRSGLTGAEW 90
T R G DGL S TG EW
Sbjct: 45 TSREGLRDGLGSWTTGLEW 63
>03_05_0421 + 24065725-24066052,24066811-24067040
Length = 185
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 7 ERGVSCNSATRRSGTEDGLRSGLTGAE 87
+RGV C A RSGT G+R + E
Sbjct: 93 KRGVGCPPARARSGTGRGMRERIQKGE 119
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 180 RPSLVNLHFP-DSSGESILTPGLVRTSSQHGPLSASESRPQTILRTRPPSSRITGDATLP 4
RP V+ + D+ GE TP R + + P + ++RP T+ + PP+ + A +P
Sbjct: 182 RPITVSYAYKKDTKGERHGTPA-ERLLAANNP-GSQKNRPHTMFASGPPTQGLANGAPVP 239
>10_05_0086 +
9025410-9025730,9025974-9026008,9026194-9026279,
9026602-9026740,9028504-9028663
Length = 246
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 140 PEESGKCRLTKEGRTGPGGKPSS 208
P +G RLT G TG GG+ SS
Sbjct: 25 PVAAGVPRLTSHGSTGGGGEESS 47
>04_03_1017 + 21747044-21748051
Length = 335
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 80 PVSPDLKPSSVPDLRVAELQETPRS 6
P SPD P+S P R A TP S
Sbjct: 58 PPSPDYTPASPPHRRAASPDYTPES 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,019,840
Number of Sequences: 37544
Number of extensions: 227221
Number of successful extensions: 629
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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