Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13k12
(272 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 0.91
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 2.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 3.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 4.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 4.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 4.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 4.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 4.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 4.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 4.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 4.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 4.8
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 20 6.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 6.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 6.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 6.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 6.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 6.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 6.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 19 8.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 19 8.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 19 8.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 19 8.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 19 8.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 8.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 19 8.4
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 0.91
Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 24 YAPYTHRVDII-NMDQFEQLI 83
Y PYT RV+I+ ++D+ + L+
Sbjct: 468 YDPYTQRVEILDSVDRLDNLM 488
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +3
Query: 96 LKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIH 221
+KSL + + V S ++ R + LT+ ++G+H
Sbjct: 97 IKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQTGLHGLH 138
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 3.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 59 INYINPMRIWCVKYIF 12
IN INP+ ++ YI+
Sbjct: 33 INSINPINVYTKAYIY 48
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 47
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 280
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 229 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 269
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 280
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 229 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 269
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 280
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 280
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 229 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 269
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 4.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 229 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 269
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 19.8 bits (39), Expect = 6.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 144 YCPTRFRR 121
Y PTRFRR
Sbjct: 29 YIPTRFRR 36
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 47
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 280
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 107 DQNANRRKRVGQYQVDERKTKKARMRQSHRQR*DIRYSRQQ 229
D+N RK+ QY+ + +K ++ R+R R+Q
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSREREQ 280
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.8 bits (39), Expect = 6.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 87 VSLLKSLIKTQIDENVSDNIK 149
VSL KSL I V DN++
Sbjct: 309 VSLDKSLEVNHISARVGDNVE 329
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 144 YCPTRFRRFA 115
YCP RF R A
Sbjct: 430 YCPVRFGRKA 439
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 216 IHDNRLNNKKIRNY 257
IH+N N KK++ Y
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 216 IHDNRLNNKKIRNY 257
IH+N N KK++ Y
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 216 IHDNRLNNKKIRNY 257
IH+N N KK++ Y
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 216 IHDNRLNNKKIRNY 257
IH+N N KK++ Y
Sbjct: 90 IHNNNNNYKKLQYY 103
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 216 IHDNRLNNKKIRNY 257
IH+N N KK++ Y
Sbjct: 323 IHNNNNNYKKLQYY 336
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.4 bits (38), Expect = 8.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 152 RLDIVRHVFVDLR 114
R+D + H+F D R
Sbjct: 221 RIDAINHMFEDAR 233
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,245
Number of Sequences: 438
Number of extensions: 934
Number of successful extensions: 33
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5263398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -