Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13k07
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 383 e-106
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 383 e-106
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 383 e-106
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 383 e-106
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 382 e-106
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 382 e-106
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 382 e-106
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 381 e-105
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 381 e-105
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 239 5e-63
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 8e-59
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 1e-53
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 167 4e-41
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 158 1e-38
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 31 3.6
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 30 8.2
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 30 8.2
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 30 8.2
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 30 8.2
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 30 8.2
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 30 8.2
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 30 8.2
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 383 bits (942), Expect = e-106
Identities = 187/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 382 bits (940), Expect = e-106
Identities = 184/208 (88%), Positives = 194/208 (93%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 567
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 568 KVKIMLPWDQQGKNGPKKPQPDHILVTE 651
KVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVE 211
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 382 bits (940), Expect = e-106
Identities = 184/208 (88%), Positives = 194/208 (93%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 567
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 568 KVKIMLPWDQQGKNGPKKPQPDHILVTE 651
KVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVE 211
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 381 bits (938), Expect = e-105
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 381 bits (937), Expect = e-105
Identities = 186/213 (87%), Positives = 196/213 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 552
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 553 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 651
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 239 bits (586), Expect = 5e-63
Identities = 113/127 (88%), Positives = 118/127 (92%)
Frame = +1
Query: 271 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 450
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 451 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 630
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 631 DHILVTE 651
DH+ + E
Sbjct: 121 DHVSIVE 127
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 8e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +1
Query: 199 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 378
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 379 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 558
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 559 LGIKVKI 579
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (509), Expect = 1e-53
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 366
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 167 bits (405), Expect = 4e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 300
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 158 bits (384), Expect = 1e-38
Identities = 73/86 (84%), Positives = 77/86 (89%)
Frame = +1
Query: 394 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 573
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 574 KIMLPWDQQGKNGPKKPQPDHILVTE 651
KIMLPWD GK GPKKP PDH+ + E
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVE 86
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 537 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGN 647
CAS RS R Q Q P P A RP PG+
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGS 150
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 258 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 130
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,765,460
Number of Sequences: 237096
Number of extensions: 2446536
Number of successful extensions: 9865
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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