Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13k03
         (283 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.         27   4.7  
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro...    27   4.7  
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P...    27   4.7  

>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 219 QNYQQVNHGKFFNVE*QQQNGASHQHRL-KTDAPTQNA 109
           Q   Q +H +    + QQQ+ A+++HRL K++ P  N+
Sbjct: 528 QQQHQQHHQQHHQQQQQQQHVAAYRHRLPKSETPETNS 565


>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p
           protein.
          Length = 1188

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 219 QNYQQVNHGKFFNVE*QQQNGASHQHRL-KTDAPTQNA 109
           Q   Q +H +    + QQQ+ A+++HRL K++ P  N+
Sbjct: 551 QQQHQQHHQQHHQQQQQQQHVAAYRHRLPKSETPETNS 588


>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
           protein.
          Length = 1165

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 219 QNYQQVNHGKFFNVE*QQQNGASHQHRL-KTDAPTQNA 109
           Q   Q +H +    + QQQ+ A+++HRL K++ P  N+
Sbjct: 528 QQQHQQHHQQHHQQQQQQQHVAAYRHRLPKSETPETNS 565


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,644,686
Number of Sequences: 53049
Number of extensions: 176186
Number of successful extensions: 319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)