Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13j21
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 30 1.3
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 30 1.3
Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 29 4.1
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 5.4
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 28 5.4
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 28 5.4
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 5.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.2
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 7.2
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 118 bits (284), Expect = 4e-27
Identities = 61/180 (33%), Positives = 98/180 (54%)
Frame = +3
Query: 135 KPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXXXXXXXXHV 314
+P+ S K + ++D RVR GNGG+G +SF + K HV
Sbjct: 19 RPILSPKKPKSEGEATSFIDYRRVRCQAGNGGNGMVSFFRGYRKPFGGPDGGDGGHGGHV 78
Query: 315 IFKATNSVRSLNHCKAVIQAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQNGQVIGDL 494
+F+A+ S + L+ ++++A+ GE G +K C GK+A H V VP+GT+ K +G I +L
Sbjct: 79 VFRASRSSKDLSTVHSIVRAQNGEFGRSKSCHGKSADHKEVEVPLGTVFK-ADGNTIFEL 137
Query: 495 DREGLMFVXXXXXXXXXXNKFFLTDTEQAPDIAEFGAAGETNIYHLEVRSLAHVGLLGFP 674
+ E MF+ N+F++++ + P AE+G GE IY +E+R +A GL+GFP
Sbjct: 138 NNENDMFIAARGGVGGRGNQFYVSNEVRKPFKAEYGGEGEELIYDVEMRVMATAGLVGFP 197
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 170 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 218
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 477 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 525
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 379 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 427
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 170 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 218
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 477 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 525
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 188 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 236
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 66 QRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGC 239
Q +K+T P+T+ R CD P R K KS+ D +H G+GG GC
Sbjct: 170 QPIKITTYLPDTIDIRKPCDCAPNYNRRDKRKSSCDDGEH---------GDGDGGGGC 218
>Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 248 EGYAAVTSISSDSPNAKGIYIMLNCISSR 162
EG+++V I +DS K YI++NC ++R
Sbjct: 56 EGWSSVEKIFADSQEQKCHYILINCGATR 84
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 534 PHPAPQQTSTPPCPNPQSLDHF 469
P+P+PQ + PP P Q HF
Sbjct: 81 PYPSPQMRAGPPPPQQQQQQHF 102
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 452 YNNKKPKWSSDWGFGQGGVDVCCGAGWGG 538
+ N P S WG G+GG G GWGG
Sbjct: 701 WGNNDPWGGSRWGGGRGGWG---GGGWGG 726
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/67 (28%), Positives = 24/67 (35%)
Frame = +2
Query: 422 WTRHCQCTNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGR*RKQIFPHGHRTGSGHSRVR 601
W C+ + N WS D G G VDV G GR P + G R
Sbjct: 50 WCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 602 GCRRNKH 622
R+K+
Sbjct: 110 SGARDKN 116
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/67 (28%), Positives = 24/67 (35%)
Frame = +2
Query: 422 WTRHCQCTNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGR*RKQIFPHGHRTGSGHSRVR 601
W C+ + N WS D G G VDV G GR P + G R
Sbjct: 50 WCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 602 GCRRNKH 622
R+K+
Sbjct: 110 SGARDKN 116
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 537 PPHPAPQQTSTPPCPNP 487
PP P P T+TPP P P
Sbjct: 150 PPCPYPPATNTPPAPEP 166
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -3
Query: 648 PVSVPPDGKCLFRLQPRTLLCPEPVLCP*GKICFLYLPPHPAPQQTSTPPCPNP 487
P+ PP C P +CP P CP +C PP P P PP P P
Sbjct: 36 PMCAPPPLPC-----PPPPICP-PQFCPPPPMCPPPPPP-PPPPMCPPPPPPMP 82
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 584 RSLFCVREEKFVSSTSRPTPRRNKHQPLPVQIPN 483
RS+ + E KF+ RP+ RR K P+PVQ P+
Sbjct: 624 RSIRSILEWKFI----RPSSRRLKITPIPVQAPS 653
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -2
Query: 463 FIIVPIGTLTMTCPAFLPLQSLLN---PFSPGFACMTALQ 353
F ++ G TMT P + L PFS G AC AL+
Sbjct: 458 FALIAAGLATMTVPLYTAYWQFLAFCVPFSIGVACFAALR 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,752,814
Number of Sequences: 27780
Number of extensions: 353273
Number of successful extensions: 1385
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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