Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13j10
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069045-1|AAH69045.1| 141|Homo sapiens NADH dehydrogenase (ubi... 72 2e-12
AJ539081-1|CAD62165.1| 141|Homo sapiens NADH-ubiquinone oxidore... 72 2e-12
L76191-1|AAC41949.1| 712|Homo sapiens interleukin-1 receptor-as... 30 8.2
DQ054788-1|AAY88246.1| 633|Homo sapiens interleukin-1 receptor ... 30 8.2
BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein. 30 8.2
BC014963-1|AAH14963.1| 633|Homo sapiens interleukin-1 receptor-... 30 8.2
AF346607-1|AAK62888.1| 682|Homo sapiens interleukin-1 receptor ... 30 8.2
AF030876-1|AAC08756.1| 712|Homo sapiens Interleukin 1 receptor-... 30 8.2
>BC069045-1|AAH69045.1| 141|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 11, 14.7kDa protein.
Length = 141
Score = 72.1 bits (169), Expect = 2e-12
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
D P+G D K + T+ A+VAGL A++ V + + P F+ + ++G +
Sbjct: 11 DIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTL-NPPGTFLEGVAKVGQYTFTAAAVGAV 69
Query: 289 FTFTTNVAQNIRGK-NDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGI 465
F TT ++ ++R K +D LNYFLGG G A I A V G A + K G
Sbjct: 70 FGLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNYGIGAAACVYFGIAASLVKMGR 129
Query: 466 DEGWIFF 486
EGW F
Sbjct: 130 LEGWEVF 136
>AJ539081-1|CAD62165.1| 141|Homo sapiens NADH-ubiquinone
oxidoreductase subunit B14.7 protein.
Length = 141
Score = 72.1 bits (169), Expect = 2e-12
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
D P+G D K + T+ A+VAGL A++ V + + P F+ + ++G +
Sbjct: 11 DIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTL-NPPGTFLEGVAKVGQYTFTAAAVGAV 69
Query: 289 FTFTTNVAQNIRGK-NDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGI 465
F TT ++ ++R K +D LNYFLGG G A I A V G A + K G
Sbjct: 70 FGLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNYGIGAAACVYFGIAASLVKMGR 129
Query: 466 DEGWIFF 486
EGW F
Sbjct: 130 LEGWEVF 136
>L76191-1|AAC41949.1| 712|Homo sapiens interleukin-1
receptor-associated kinase protein.
Length = 712
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 274 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 321
>DQ054788-1|AAY88246.1| 633|Homo sapiens interleukin-1 receptor
associated-kinase 1 splice variant c protein.
Length = 633
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 274 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 321
>BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein.
Length = 693
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 300 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 347
>BC014963-1|AAH14963.1| 633|Homo sapiens interleukin-1
receptor-associated kinase 1 protein.
Length = 633
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 274 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 321
>AF346607-1|AAK62888.1| 682|Homo sapiens interleukin-1 receptor
associated kinase 1b protein.
Length = 682
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 274 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 321
>AF030876-1|AAC08756.1| 712|Homo sapiens Interleukin 1
receptor-associated kinase 1 protein.
Length = 712
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 225 FCQYNRSNGLYCR-----PPSGYGSCLHIHYQRCPKYSWEKR*TQLLLG 356
F Y NG YC P LH Q CP SW +R +LLG
Sbjct: 274 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQR-LDILLG 321
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,214,503
Number of Sequences: 237096
Number of extensions: 2012036
Number of successful extensions: 4101
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4097
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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