Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13j10
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075551-1|AAL68358.1|  170|Drosophila melanogaster RH51452p pro...   148   6e-36
AY070603-1|AAL48074.1|  170|Drosophila melanogaster RE70703p pro...   148   6e-36
AE013599-3111|AAF46658.1|  170|Drosophila melanogaster CG9350-PB...   148   6e-36
AE013599-3110|AAM68190.1|  170|Drosophila melanogaster CG9350-PA...   148   6e-36

>AY075551-1|AAL68358.1|  170|Drosophila melanogaster RH51452p
           protein.
          Length = 170

 Score =  148 bits (359), Expect = 6e-36
 Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = +1

Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
           D P+G+D F K   T+KYA  AG+A + FDVL  S P+G++ T+GR  Y  GPL+GMA A
Sbjct: 10  DHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYLPTLGRFAYNTGPLMGMATA 69

Query: 289 FTFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGID 468
           FT TT VA N RGK+DK+NY +GG  +G VF AW    +  + A + LG   V+KK  I+
Sbjct: 70  FTLTTLVATNARGKDDKINYLIGGFAAGGVFGAWKHNHVAGLCAGLFLGIAGVIKKMSIE 129

Query: 469 EGWIFFPDA-AQSTKTIKSVKHDWTLLKDIEELKGWT 576
           +GW FFP+   +    +    +DWT++ D    K WT
Sbjct: 130 QGWEFFPNTPIKQYGGLNIAGNDWTIMAD--PPKNWT 164


>AY070603-1|AAL48074.1|  170|Drosophila melanogaster RE70703p
           protein.
          Length = 170

 Score =  148 bits (359), Expect = 6e-36
 Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = +1

Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
           D P+G+D F K   T+KYA  AG+A + FDVL  S P+G++ T+GR  Y  GPL+GMA A
Sbjct: 10  DHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYLPTLGRFAYNTGPLMGMATA 69

Query: 289 FTFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGID 468
           FT TT VA N RGK+DK+NY +GG  +G VF AW    +  + A + LG   V+KK  I+
Sbjct: 70  FTLTTLVATNARGKDDKINYLIGGFAAGGVFGAWKHNHVAGLCAGLFLGIAGVIKKMSIE 129

Query: 469 EGWIFFPDA-AQSTKTIKSVKHDWTLLKDIEELKGWT 576
           +GW FFP+   +    +    +DWT++ D    K WT
Sbjct: 130 QGWEFFPNTPIKQYGGLNIAGNDWTIMAD--PPKNWT 164


>AE013599-3111|AAF46658.1|  170|Drosophila melanogaster CG9350-PB,
           isoform B protein.
          Length = 170

 Score =  148 bits (359), Expect = 6e-36
 Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = +1

Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
           D P+G+D F K   T+KYA  AG+A + FDVL  S P+G++ T+GR  Y  GPL+GMA A
Sbjct: 10  DHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYLPTLGRFAYNTGPLMGMATA 69

Query: 289 FTFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGID 468
           FT TT VA N RGK+DK+NY +GG  +G VF AW    +  + A + LG   V+KK  I+
Sbjct: 70  FTLTTLVATNARGKDDKINYLIGGFAAGGVFGAWKHNHVAGLCAGLFLGIAGVIKKMSIE 129

Query: 469 EGWIFFPDA-AQSTKTIKSVKHDWTLLKDIEELKGWT 576
           +GW FFP+   +    +    +DWT++ D    K WT
Sbjct: 130 QGWEFFPNTPIKQYGGLNIAGNDWTIMAD--PPKNWT 164


>AE013599-3110|AAM68190.1|  170|Drosophila melanogaster CG9350-PA,
           isoform A protein.
          Length = 170

 Score =  148 bits (359), Expect = 6e-36
 Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
 Frame = +1

Query: 109 DTPEGQDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVA 288
           D P+G+D F K   T+KYA  AG+A + FDVL  S P+G++ T+GR  Y  GPL+GMA A
Sbjct: 10  DHPDGEDAFGKIVATNKYAVSAGVAWSMFDVLTLSKPQGYLPTLGRFAYNTGPLMGMATA 69

Query: 289 FTFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVPAAVVLGAIAVVKKTGID 468
           FT TT VA N RGK+DK+NY +GG  +G VF AW    +  + A + LG   V+KK  I+
Sbjct: 70  FTLTTLVATNARGKDDKINYLIGGFAAGGVFGAWKHNHVAGLCAGLFLGIAGVIKKMSIE 129

Query: 469 EGWIFFPDA-AQSTKTIKSVKHDWTLLKDIEELKGWT 576
           +GW FFP+   +    +    +DWT++ D    K WT
Sbjct: 130 QGWEFFPNTPIKQYGGLNIAGNDWTIMAD--PPKNWT 164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,815,885
Number of Sequences: 53049
Number of extensions: 604048
Number of successful extensions: 1487
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)