Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13i21
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.3  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   8.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.3  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 325 PLLLNCQNHIPNNVEEESEIVFELSI 248
           PL+L+   H P+  +  +E+V E+ +
Sbjct: 232 PLILSANGHDPDYFDIPNELVLEVPL 257


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 387 THTTNKLCL 361
           THTTN  CL
Sbjct: 38  THTTNAFCL 46


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 387 THTTNKLCL 361
           THTTN  CL
Sbjct: 37  THTTNAFCL 45


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 70  ITARKRKRLLKKGHF 114
           +TA +++ +LKKG+F
Sbjct: 468 LTALRKRDVLKKGNF 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,236
Number of Sequences: 438
Number of extensions: 1258
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)