Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13h08
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10117-1|AAA62202.1|  312|Homo sapiens endothelial-monocyte acti...    97   7e-20
CR542281-1|CAG47076.1|  312|Homo sapiens SCYE1 protein.                97   7e-20
BC014051-1|AAH14051.1|  312|Homo sapiens small inducible cytokin...    97   7e-20
U89436-1|AAB88409.1|  528|Homo sapiens tyrosyl-tRNA synthetase p...    95   3e-19
BC016689-1|AAH16689.1|  528|Homo sapiens tyrosyl-tRNA synthetase...    95   3e-19
BC004151-1|AAH04151.1|  528|Homo sapiens tyrosyl-tRNA synthetase...    95   3e-19
BC001933-1|AAH01933.1|  528|Homo sapiens tyrosyl-tRNA synthetase...    95   3e-19
AK223608-1|BAD97328.1|  528|Homo sapiens tyrosyl-tRNA synthetase...    95   3e-19

>U10117-1|AAA62202.1|  312|Homo sapiens endothelial-monocyte
           activating polypeptide II protein.
          Length = 312

 Score = 96.7 bits (230), Expect = 7e-20
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = +3

Query: 480 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 659
           +DV +LD RIG I+   KHPDADSLYVE++D GE  PRTVVSGLVNHVP+++M+ R+V++
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209

Query: 660 LCNL 671
           LCNL
Sbjct: 210 LCNL 213


>CR542281-1|CAG47076.1|  312|Homo sapiens SCYE1 protein.
          Length = 312

 Score = 96.7 bits (230), Expect = 7e-20
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = +3

Query: 480 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 659
           +DV +LD RIG I+   KHPDADSLYVE++D GE  PRTVVSGLVNHVP+++M+ R+V++
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209

Query: 660 LCNL 671
           LCNL
Sbjct: 210 LCNL 213


>BC014051-1|AAH14051.1|  312|Homo sapiens small inducible cytokine
           subfamily E, member 1 (endothelial monocyte-activating
           protein.
          Length = 312

 Score = 96.7 bits (230), Expect = 7e-20
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = +3

Query: 480 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 659
           +DV +LD RIG I+   KHPDADSLYVE++D GE  PRTVVSGLVNHVP+++M+ R+V++
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209

Query: 660 LCNL 671
           LCNL
Sbjct: 210 LCNL 213


>U89436-1|AAB88409.1|  528|Homo sapiens tyrosyl-tRNA synthetase
           protein.
          Length = 528

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 492 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 671
           +LD R+GKI+ + KHPDADSLYVEKID GE  PRTVVSGLV  VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426


>BC016689-1|AAH16689.1|  528|Homo sapiens tyrosyl-tRNA synthetase
           protein.
          Length = 528

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 492 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 671
           +LD R+GKI+ + KHPDADSLYVEKID GE  PRTVVSGLV  VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426


>BC004151-1|AAH04151.1|  528|Homo sapiens tyrosyl-tRNA synthetase
           protein.
          Length = 528

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 492 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 671
           +LD R+GKI+ + KHPDADSLYVEKID GE  PRTVVSGLV  VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426


>BC001933-1|AAH01933.1|  528|Homo sapiens tyrosyl-tRNA synthetase
           protein.
          Length = 528

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 492 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 671
           +LD R+GKI+ + KHPDADSLYVEKID GE  PRTVVSGLV  VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426


>AK223608-1|BAD97328.1|  528|Homo sapiens tyrosyl-tRNA synthetase
           variant protein.
          Length = 528

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 492 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 671
           +LD R+GKI+ + KHPDADSLYVEKID GE  PRTVVSGLV  VP +E+++R+V+VLCNL
Sbjct: 367 RLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNL 426


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,335,281
Number of Sequences: 237096
Number of extensions: 1156941
Number of successful extensions: 1792
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)