Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13h07
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.8  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   6.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 231 MFFILKHFPHVF 196
           +++I  HFP+VF
Sbjct: 111 IYYIWSHFPYVF 122


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 163 NMSAEQTDTATEDMRKMLQDKEHLESEVL 249
           +MSA+Q +   ++MRK    K  +  E++
Sbjct: 23  SMSADQVEKLAKNMRKSCLQKIAITEELV 51


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 272 SCKPSVKIRNLRFKAYSCLL 331
           +C     + N+  K Y CLL
Sbjct: 47  ACGSETPLTNIEEKTYQCLL 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,755
Number of Sequences: 438
Number of extensions: 2080
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)