Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13g19
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    31   1.3  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    31   1.3  
BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p pro...    30   2.3  
BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p pro...    30   3.0  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   5.3  

>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = +2

Query: 134 FKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNIN 313
           ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++  + K    
Sbjct: 460 YQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLENMGKSPRT 519

Query: 314 YILNVMPVMXDERKMSKRKKXVINN 388
             L+      D+    + +  ++NN
Sbjct: 520 RSLSDGGTQDDDEAEKEAQPDLLNN 544


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = +2

Query: 134 FKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNIN 313
           ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++  + K    
Sbjct: 731 YQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLENMGKSPRT 790

Query: 314 YILNVMPVMXDERKMSKRKKXVINN 388
             L+      D+    + +  ++NN
Sbjct: 791 RSLSDGGTQDDDEAEKEAQPDLLNN 815


>BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p
           protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +2

Query: 173 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--XD 346
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M   D
Sbjct: 135 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 188

Query: 347 ERKMSKRKK 373
           ++K++K+KK
Sbjct: 189 KKKLNKKKK 197


>BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p
           protein.
          Length = 258

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +2

Query: 173 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--XD 346
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M   D
Sbjct: 195 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 248

Query: 347 ERKMSKRKK 373
           ++K+ K+KK
Sbjct: 249 KKKLKKKKK 257


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 164  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 262
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,320,533
Number of Sequences: 53049
Number of extensions: 555968
Number of successful extensions: 1562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)