Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13g01
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1016 - 22262760-22264331                                        166   1e-41
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844...   113   1e-25
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449...    29   4.6  
01_05_0250 - 19907517-19908429,19910000-19910268                       28   6.0  
01_05_0194 - 19107143-19108055,19110864-19111132                       28   6.0  
10_08_1059 + 22618999-22619206,22620386-22620416,22620440-226209...    28   8.0  
01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951           28   8.0  

>10_08_1016 - 22262760-22264331
          Length = 523

 Score =  166 bits (404), Expect = 1e-41
 Identities = 77/168 (45%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
 Frame = +1

Query: 151 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQPPSEWVVCALE 330
           +LCC C V ++ NP+NMC  C+RA VDIT+G+P+ A + +C  C  YLQPP  W+    E
Sbjct: 24  VLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYLQPPRSWLRAGPE 83

Query: 331 SRE---XXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQTFIV 501
           S E                RV L  A F ++EPHSKR+++KL ++ EV    VL+QT  V
Sbjct: 84  SPELMQILLRRLNRPLARLRVSLSAAEFVFSEPHSKRLRLKLRLRREVFNAVVLEQTHPV 143

Query: 502 EFTIQHQMCDACHRSEAQ-DYWRALVQVRQRANNRKTFYYLEQLILKH 642
           EFT+  ++CDAC R+++  D W A+VQ+RQ   +R+TF YLEQL+LKH
Sbjct: 144 EFTVHDRLCDACARAQSNPDQWVAVVQLRQHVPHRRTFLYLEQLLLKH 191


>01_07_0232 +
           42182942-42183490,42183593-42183661,42184320-42184451,
           42184547-42184600,42184714-42184758,42185383-42185522,
           42185777-42185902,42185985-42186002,42186631-42187276,
           42188121-42188843
          Length = 833

 Score =  113 bits (272), Expect = 1e-25
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
 Frame = +1

Query: 97  MKMEYFAPENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCR 276
           + M++  P     +     +CC C VP+  N +N C  C+R+ VDI  G+P+ A +  C 
Sbjct: 419 LSMQFLPPRPEPAAAARTSICCTCGVPMAPNAANTCALCIRSRVDIAAGVPRHADVVHCP 478

Query: 277 GCERYLQPPSEWVVCALESREXXXXXXXXXXXXSR---VKLIDAGFAWTEPHSKRIKVKL 447
            C  YL PP  W+  A ES E                 V L  A F +TEPHS+R+ ++L
Sbjct: 479 SCSSYLHPPRLWLRAAPESPELMSLLLRRVDRHIARLGVALAAAEFVFTEPHSRRLMLRL 538

Query: 448 TVQGEVI----GGAVLQQTFIVEFTIQHQMCDACHRSEAQ 555
            ++GEV+    GG  L+Q  +VEF +  ++CDAC  + A+
Sbjct: 539 RLRGEVLHGSGGGVTLEQGHVVEFAVHDRLCDACAMARAR 578


>12_02_0858 +
           23740589-23743233,23743362-23743503,23744778-23744990,
           23745083-23745190,23745378-23745587,23745881-23746055,
           23746197-23746264
          Length = 1186

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 374 NPFNLLRQRAKSSRDSNAHTTHSEGGCKYLSQPLQKNNVAC 252
           +P   + Q   SS  S+ H   S G  KY+    Q+  VAC
Sbjct: 146 HPVFPVTQGVSSSNSSSQHVVSSSGEAKYIGNSGQEMQVAC 186


>01_05_0250 - 19907517-19908429,19910000-19910268
          Length = 393

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 241 GIPKQATLFFCRGCERYLQP 300
           GIP  A+ F C+ CE  LQP
Sbjct: 78  GIPLAASTFLCQRCETVLQP 97


>01_05_0194 - 19107143-19108055,19110864-19111132
          Length = 393

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 241 GIPKQATLFFCRGCERYLQP 300
           GIP  A+ F C+ CE  LQP
Sbjct: 78  GIPLAASTFLCQRCETVLQP 97


>10_08_1059 +
           22618999-22619206,22620386-22620416,22620440-22620974,
           22621065-22621319
          Length = 342

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 490 TFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLI 633
           TF+V            H+S + D+W AL+ V +  N     Y ++ LI
Sbjct: 184 TFVVWIVGMFLAPKMSHKSGSNDFWGALLNVEEIKNYNWAKYVIDHLI 231


>01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951
          Length = 563

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 496 IVEFTI--QHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLIL 636
           I +F I  +  MCD     E    W A   ++++A NRK   Y   L+L
Sbjct: 410 IADFGIACEESMCDVLVEDEGTYRWMAPEMIKRKAYNRKVDVYSFGLLL 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,510
Number of Sequences: 37544
Number of extensions: 330304
Number of successful extensions: 741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)