Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13g01
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058494-1|AAL13723.1| 521|Drosophila melanogaster GM14705p pro... 291 4e-79
AL009194-7|CAA15695.1| 521|Drosophila melanogaster EG:152A3.1 p... 291 4e-79
AE014298-354|AAF45744.1| 521|Drosophila melanogaster CG3460-PA ... 291 4e-79
AJ238705-1|CAB42049.1| 521|Drosophila melanogaster Nmd3 protein... 291 6e-79
AE014296-3383|AAF51617.2| 405|Drosophila melanogaster CG5078-PA... 30 3.4
AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA... 30 3.4
AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p pro... 29 4.5
AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB... 29 4.5
AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA... 29 4.5
>AY058494-1|AAL13723.1| 521|Drosophila melanogaster GM14705p
protein.
Length = 521
Score = 291 bits (715), Expect = 4e-79
Identities = 128/189 (67%), Positives = 148/189 (78%)
Frame = +1
Query: 115 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 294
A + +N ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13 AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72
Query: 295 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 474
QPP+EW+ ALESRE VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73 QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132
Query: 475 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 654
+LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192
Query: 655 NTLGIKPKH 681
NTLGIKP+H
Sbjct: 193 NTLGIKPEH 201
>AL009194-7|CAA15695.1| 521|Drosophila melanogaster EG:152A3.1
protein.
Length = 521
Score = 291 bits (715), Expect = 4e-79
Identities = 128/189 (67%), Positives = 148/189 (78%)
Frame = +1
Query: 115 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 294
A + +N ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13 AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72
Query: 295 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 474
QPP+EW+ ALESRE VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73 QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132
Query: 475 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 654
+LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192
Query: 655 NTLGIKPKH 681
NTLGIKP+H
Sbjct: 193 NTLGIKPEH 201
>AE014298-354|AAF45744.1| 521|Drosophila melanogaster CG3460-PA
protein.
Length = 521
Score = 291 bits (715), Expect = 4e-79
Identities = 128/189 (67%), Positives = 148/189 (78%)
Frame = +1
Query: 115 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 294
A + +N ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13 AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72
Query: 295 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 474
QPP+EW+ ALESRE VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73 QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132
Query: 475 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 654
+LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192
Query: 655 NTLGIKPKH 681
NTLGIKP+H
Sbjct: 193 NTLGIKPEH 201
>AJ238705-1|CAB42049.1| 521|Drosophila melanogaster Nmd3 protein
protein.
Length = 521
Score = 291 bits (714), Expect = 6e-79
Identities = 127/189 (67%), Positives = 148/189 (78%)
Frame = +1
Query: 115 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 294
A + +N ILCC+C V I+ NP+NMCV CLR HVDIT+ +PKQA L FCR CERYL
Sbjct: 13 AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENVPKQAVLHFCRNCERYL 72
Query: 295 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 474
QPP+EW+ ALESRE VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73 QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132
Query: 475 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 654
+LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192
Query: 655 NTLGIKPKH 681
NTLGIKP+H
Sbjct: 193 NTLGIKPEH 201
>AE014296-3383|AAF51617.2| 405|Drosophila melanogaster CG5078-PA
protein.
Length = 405
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 473 PPITSPCTVSFTFILFECGSVQAKPASINLTL 378
P + C V FTF+L E G + PA + LT+
Sbjct: 185 PNVLLLCVVMFTFLLPEAGEYSSVPAYLKLTM 216
>AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA
protein.
Length = 549
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -1
Query: 428 FECGSVQAKPASINLTLLNPFNLLRQRAKSSRDSNAHTTHSEGGCKYLSQP 276
FE + A+P S T P L QRA+ +R A HS G S+P
Sbjct: 138 FERIATAARPGSSIKTAFQPRPLTSQRAQQARSRGAGVAHSSDGRLNSSRP 188
>AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p
protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 549 F*TMASIAHLMLNCKFNYKCLLEHCSSDNFALYS*FYLYSLRMWLSP 409
F MA+ L + + +KCL C+S N F LYS W P
Sbjct: 287 FFVMAAFFWLSIISRHYWKCLTNPCASMNIRSERAFLLYSCFAWAMP 333
>AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB,
isoform B protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 549 F*TMASIAHLMLNCKFNYKCLLEHCSSDNFALYS*FYLYSLRMWLSP 409
F MA+ L + + +KCL C+S N F LYS W P
Sbjct: 287 FFVMAAFFWLSIISRHYWKCLTNPCASMNIRSERAFLLYSCFAWAMP 333
>AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA,
isoform A protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 549 F*TMASIAHLMLNCKFNYKCLLEHCSSDNFALYS*FYLYSLRMWLSP 409
F MA+ L + + +KCL C+S N F LYS W P
Sbjct: 287 FFVMAAFFWLSIISRHYWKCLTNPCASMNIRSERAFLLYSCFAWAMP 333
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,523,823
Number of Sequences: 53049
Number of extensions: 604235
Number of successful extensions: 1493
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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