Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13f23
         (198 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000038295C Cluster: hypothetical protein Magn0300173...    31   4.9  
UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmi...    31   4.9  
UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_UPI0000E4732E Cluster: PREDICTED: similar to MGC83042 p...    31   6.5  
UniRef50_Q52UN7 Cluster: Major capsid protein; n=6; Unassigned H...    30   8.6  

>UniRef50_UPI000038295C Cluster: hypothetical protein Magn03001734;
           n=1; Magnetospirillum magnetotacticum MS-1|Rep:
           hypothetical protein Magn03001734 - Magnetospirillum
           magnetotacticum MS-1
          Length = 101

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -2

Query: 137 RFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKS 27
           R +   KG+GR ++R  Q+A DLG R   L R ++++
Sbjct: 16  RLWRSVKGLGRELSRASQVAGDLGARADELARAQQEA 52


>UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmic
           phosphonate-binding protein precursor; n=23;
           Proteobacteria|Rep: Phosphonate ABC transporter,
           periplasmic phosphonate-binding protein precursor -
           Marinomonas sp. MWYL1
          Length = 347

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 30  LLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFG 164
           +LS    A+  +S++++++VD++ VS D F +   S      SFG
Sbjct: 214 VLSGDYDAAPVASDVFKRMVDAKRVSKDDFRIIYTSPRFPTSSFG 258


>UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1;
            Magnaporthe grisea|Rep: Putative uncharacterized protein
            - Magnaporthe grisea (Rice blast fungus) (Pyricularia
            grisea)
          Length = 4052

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 21   KTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLVSSRS 185
            +T  L   + ASLPS +++  L+   H++ DSF + +    L+    G ++  R+
Sbjct: 2676 ETGELVKMVLASLPSGQVHHLLIGYHHINMDSFSMAILMSELLQLYAGTVLEPRT 2730


>UniRef50_UPI0000E4732E Cluster: PREDICTED: similar to MGC83042
           protein; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC83042 protein -
           Strongylocentrotus purpuratus
          Length = 719

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 192 FC*SAMKLTTQNCEE*GIKILRRLQRSRKKHGENLPTGGRSRRK 61
           FC   M  TT  C+E  +K L R +R +K+  +  P+G + + K
Sbjct: 281 FCCMVMS-TTSRCQESSLKRLERKERKQKRDLKKNPSGSKKKDK 323


>UniRef50_Q52UN7 Cluster: Major capsid protein; n=6; Unassigned
            Herpesviridae|Rep: Major capsid protein - Cyprinid
            herpesvirus 1
          Length = 1269

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 164  PKTVKNKGLRFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCR 36
            P +  +K   FYVD+  +G N  ++ +  V++  R   L  CR
Sbjct: 1173 PHSFNSKSSMFYVDNSTIGANSDQLLKSPVNMDNRNNFLLMCR 1215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,084,956
Number of Sequences: 1657284
Number of extensions: 2753655
Number of successful extensions: 8168
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8168
length of database: 575,637,011
effective HSP length: 45
effective length of database: 501,059,231
effective search space used: 10021184620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)