Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13f22
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.66 
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   8.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.1  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 339 WYRQLVTPLEGSWCLEISVVRSGSLAIQRLDHQGPGVAWNSS 214
           WYR +++ L GSW           + +  L  Q P V W +S
Sbjct: 362 WYRNVLSRLSGSWTARERDSSVLEVIVSTLFPQHPPVDWPAS 403


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 174 VTCGPNEALVISGCCYSKP 230
           V CG  +  V  GC Y KP
Sbjct: 66  VRCGGRKRPVHKGCTYGKP 84


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 177 TCGPNEALVISGCC 218
           TCG NEAL   G C
Sbjct: 209 TCGRNEALQACGTC 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,952
Number of Sequences: 2352
Number of extensions: 14576
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)