Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f21
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisia... 154 3e-37
BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in endop... 154 3e-37
AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in endop... 154 3e-37
AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in endop... 154 3e-37
AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein. 154 3e-37
AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein. 154 3e-37
CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein. 152 1e-36
AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in endop... 151 3e-36
AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein. 151 3e-36
AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in endop... 41 0.004
BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 1... 31 5.4
AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 1... 31 5.4
AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 1... 31 5.4
>BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisiae
RER1 protein.
Length = 196
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog (S. cerevisiae) protein.
Length = 196
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologdogene protein.
Length = 158
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLF 701
K L+A CTF DAFN+PVFWPILVMYFI LF
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLF 158
>AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologquitin protein ligase 1
protein.
Length = 196
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein.
Length = 196
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein.
Length = 214
Score = 154 bits (373), Expect = 3e-37
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein.
Length = 196
Score = 152 bits (368), Expect = 1e-36
Identities = 68/128 (53%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTIQNEEFRPFIRRLPEF 119
Query: 584 KFWLSVTK 607
KFW + TK
Sbjct: 120 KFWHAATK 127
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 606 KSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMK 716
K L+A CTF DAFN+PVFWPILVMYFI LFCITMK
Sbjct: 127 KGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK 163
>AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog; alpha polypeptide
protein.
Length = 187
Score = 151 bits (365), Expect = 3e-36
Identities = 66/123 (53%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFW 592
KFW
Sbjct: 120 KFW 122
>AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein.
Length = 206
Score = 151 bits (365), Expect = 3e-36
Identities = 66/123 (53%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 583
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 584 KFW 592
KFW
Sbjct: 120 KFW 122
>AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog, 11, 17.3kDa protein.
Length = 117
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 227 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 403
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 404 KQ 409
Q
Sbjct: 61 LQ 62
>BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 376 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 287
H QG PPC C+ P+ C + YSCP
Sbjct: 338 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
>AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 12
protein.
Length = 646
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 376 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 287
H QG PPC C+ P+ C + YSCP
Sbjct: 471 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 501
>AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 376 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 287
H QG PPC C+ P+ C + YSCP
Sbjct: 338 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,570,286
Number of Sequences: 237096
Number of extensions: 2132456
Number of successful extensions: 4575
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4566
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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