Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13f17
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   2.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   6.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   6.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   6.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   8.5  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 8   TDGRFPPLW 34
           T+GR PP+W
Sbjct: 216 TEGRLPPVW 224


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 233 YTQEGSYSRRSCGY 274
           Y Q  +Y   SCGY
Sbjct: 338 YDQSSAYDASSCGY 351


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +2

Query: 260 RSCGYHNP 283
           ++CGYH+P
Sbjct: 37  KACGYHSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 68   TLDHHKVVVYFT 33
            T D +KVV YFT
Sbjct: 2317 TSDDYKVVCYFT 2328


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 151 STSNSLTPRPSSVMVDSRRRLTRLHSWVHS 240
           +T+N++   P+SV  +S       H +  S
Sbjct: 457 NTNNAIMTPPASVQTESSDNYNSFHQFYSS 486


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 290 PRWGCGSRS 264
           PRWGC   S
Sbjct: 53  PRWGCARAS 61


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 151 STSNSLTPRPSSVMVDSRRRLTRLHSWVHS 240
           +T+N++   P+SV  +S       H +  S
Sbjct: 405 NTNNAIMTPPASVQTESSDNYNSFHQFYSS 434


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 4/10 (40%), Positives = 8/10 (80%)
 Frame = -1

Query: 350 FFFCIVKCLF 321
           +F C++ C+F
Sbjct: 160 YFLCVIVCIF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,550
Number of Sequences: 336
Number of extensions: 1661
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)