Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f13
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 294 2e-78
UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic... 192 6e-48
UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: G... 137 3e-31
UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2; ... 83 7e-15
UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1; ... 73 6e-12
UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent viru... 71 3e-11
UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6; Enterobac... 65 2e-09
UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 - A... 63 6e-09
UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 62 1e-08
UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum granuloviru... 61 3e-08
UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22; Enterobacte... 60 6e-08
UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI... 59 1e-07
UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2; ... 58 2e-07
UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3; Nucleopolyhedrovi... 57 5e-07
UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua NP... 56 7e-07
UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29; Gammapr... 56 1e-06
UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2; ... 55 2e-06
UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain prote... 55 2e-06
UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular o... 55 2e-06
UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2; Desulfov... 55 2e-06
UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal... 54 5e-06
UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11; Vibriona... 54 5e-06
UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;... 53 9e-06
UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain prot... 50 5e-05
UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain prote... 50 6e-05
UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain prot... 49 1e-04
UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15; Pseudomon... 48 2e-04
UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protei... 48 3e-04
UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain prot... 48 3e-04
UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain prot... 48 3e-04
UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_0086... 47 4e-04
UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 47 4e-04
UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n... 47 4e-04
UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 47 4e-04
UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11; Bacteria|... 47 4e-04
UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n... 47 6e-04
UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_2012... 46 0.001
UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI... 46 0.001
UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protei... 46 0.001
UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8; Streptoco... 46 0.001
UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;... 45 0.002
UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6; Lactobaci... 45 0.002
UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 45 0.002
UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal... 45 0.002
UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 44 0.003
UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7; Proteobac... 44 0.003
UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular ... 44 0.003
UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protei... 44 0.004
UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;... 44 0.005
UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cyd... 43 0.007
UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear ... 43 0.010
UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3... 43 0.010
UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain prot... 43 0.010
UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter viola... 42 0.013
UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protei... 42 0.013
UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9; ... 42 0.017
UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain prot... 42 0.017
UniRef50_Q9DVU6 Cluster: PxORF87 peptide; n=1; Plutella xylostel... 42 0.022
UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain prote... 40 0.051
UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3; ... 40 0.051
UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS003... 40 0.051
UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain prot... 40 0.067
UniRef50_Q4UMD7 Cluster: Excinuclease ABC, C subunit, N-terminal... 40 0.089
UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3; ... 40 0.089
UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73; Bacilli|... 40 0.089
UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 39 0.12
UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protei... 39 0.12
UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus ... 39 0.16
UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protei... 38 0.21
UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal... 38 0.21
UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 38 0.21
UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus oeni... 38 0.27
UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease ... 38 0.36
UniRef50_Q4FLX0 Cluster: Excinuclease ABC; n=2; Candidatus Pelag... 38 0.36
UniRef50_Q3STS6 Cluster: Excinuclease ABC, C subunit; n=3; Rhizo... 38 0.36
UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium... 38 0.36
UniRef50_Q0VNB7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.36
UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 38 0.36
UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI... 38 0.36
UniRef50_Q7T9S7 Cluster: Gp41; n=1; Adoxophyes orana granuloviru... 37 0.47
UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 37 0.47
UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain prot... 37 0.47
UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep... 37 0.63
UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain... 36 0.83
UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia... 36 0.83
UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain prot... 36 0.83
UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core ... 36 0.83
UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5; ... 36 0.83
UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protei... 36 1.1
UniRef50_A3XQ90 Cluster: Endo/excinuclease amino terminal domain... 36 1.1
UniRef50_Q8DE33 Cluster: Predicted endonuclease; n=7; Proteobact... 36 1.4
UniRef50_Q0LXL6 Cluster: Excinuclease ABC, C subunit-like; n=3; ... 36 1.4
UniRef50_A2U060 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1; Acan... 36 1.4
UniRef50_Q1GQY7 Cluster: Excinuclease ABC, C subunit-like protei... 34 3.3
UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.3
UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.3
UniRef50_Q5CRL8 Cluster: Sin3 like paired amphipathic helix cont... 34 3.3
UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacter... 34 3.3
UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3; ... 34 4.4
UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI... 34 4.4
UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 34 4.4
UniRef50_Q14PT1 Cluster: Putative uncharacterized protein yazA; ... 33 5.8
UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis thalia... 33 5.8
UniRef50_A7IVR4 Cluster: Putative uncharacterized protein B039L;... 33 7.7
UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 294 bits (721), Expect = 2e-78
Identities = 141/154 (91%), Positives = 144/154 (93%)
Frame = +2
Query: 2 AVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSAS 181
AVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRAR+MSLKENVAFLAPLSAS
Sbjct: 255 AVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARVMSLKENVAFLAPLSAS 314
Query: 182 ANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETL 361
ANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTK+ACQ+SLTELAFQNETL
Sbjct: 315 ANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKSACQESLTELAFQNETL 374
Query: 362 RRFIFQQINYNKDXXXXXXXXXPNVTRPNTKGRT 463
RRFIFQQINYNKD PN TRPNTKGRT
Sbjct: 375 RRFIFQQINYNKDANAIIAAAAPNATRPNTKGRT 408
>UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic
region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein
in VLF1-GP41 intergenic region - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 104
Score = 192 bits (469), Expect = 6e-48
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +1
Query: 472 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA 651
MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA
Sbjct: 1 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA 60
Query: 652 SAYDYKTAARMEYNLKRKCSKYFKLRLIKA 741
SAYDY TAARMEYNLKRKCSKYFKLRLIKA
Sbjct: 61 SAYDYNTAARMEYNLKRKCSKYFKLRLIKA 90
>UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: Gp41
- Ecotropis obliqua NPV
Length = 338
Score = 137 bits (331), Expect = 3e-31
Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 9/142 (6%)
Frame = +2
Query: 2 AVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSAS 181
AV S+++ +N I LIN +I+D+FA GG+YY+YVLNEK RARI+SLKEN+ +L LS +
Sbjct: 191 AVSSKKYTQLNNIIMLINQIIEDVFASGGEYYYYVLNEKTRARIISLKENLTYLGALSET 250
Query: 182 ANIFNYMAELATRAGKQPSMFQNATFLTSAA---------NAVNSPAAHLTKNACQDSLT 334
NIF ++AE+ATR GKQP +F++A +T+++ + + A + SLT
Sbjct: 251 TNIFEFIAEMATRRGKQPGLFRDAYSITNSSTPPQRKSQPKSASVNAEETLHEQYRRSLT 310
Query: 335 ELAFQNETLRRFIFQQINYNKD 400
E+AFQNE LRRFIFQQ++Y +
Sbjct: 311 EMAFQNEALRRFIFQQLSYKNN 332
>UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 135
Score = 100 bits (240), Expect = 3e-20
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +1
Query: 481 TLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAY 660
++YT +WC+Y++R G +YTGITSN+++R KQH + GAKCLR+ T L VY S Y
Sbjct: 9 SVYTKNIWCLYMIRMPCGSIYTGITSNVDKRFKQHCDGTGAKCLRSKTPLVKVYSSPCVY 68
Query: 661 DYKTAARMEYNLKRKCSKYFKLRLI 735
D+KT AR+EY +K + +K FK +LI
Sbjct: 69 DHKTVARIEYEIKHRRNKSFKEKLI 93
>UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 98
Score = 83.0 bits (196), Expect = 7e-15
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN-LRLVYHSASAYDYKTA 675
+WC+Y++R LYTGIT N++RR QH+ +GAKCLR + N L+L Y + S Y Y+
Sbjct: 1 MWCLYLIRAKGDMLYTGITKNISRRFYQHNKGRGAKCLRASKNALQLAYVTPSTYTYRQV 60
Query: 676 ARMEYNLKRKCSKY 717
AR EY LKRK K+
Sbjct: 61 ARAEYKLKRKPKKF 74
>UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 96
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +1
Query: 484 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYD 663
++ + WCVYI+R NG+LYTG+++ + R + H N +GAKCLR T L LVY + S
Sbjct: 1 MFKSNSWCVYIIRMPNGRLYTGMSNRVLNRFRDHCNGRGAKCLRGKTPLALVYKTESCLT 60
Query: 664 YKTAARMEYNLKRKCSKYFKLRLI 735
K AAR+E ++K SK K ++I
Sbjct: 61 RKEAARLEIHIK-NLSKKAKEKII 83
>UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1;
Spodoptera frugiperda ascovirus 1a|Rep: 13 kDa
GIY-YIG-like endonuclease - Spodoptera frugiperda
ascovirus 1a
Length = 112
Score = 73.3 bits (172), Expect = 6e-12
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y+++ NG +YTG + ++ RR K H + +GAKCLR A LRL++ S + A
Sbjct: 7 WKLYMIQMVNGNIYTGASKDVERRFKMHCSGRGAKCLRGAQGLRLIWTSDETFTKSEALS 66
Query: 682 MEYNLKRKCSKYFKL 726
+EY LKR C + KL
Sbjct: 67 LEYRLKRACDHHAKL 81
>UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent virus
6|Rep: 242L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 99
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++ NG +YTGI++N+ +R H N +GAKCLR L+L + S + Y + AA
Sbjct: 7 WNIYMVTMKNGNIYTGISNNVLKRFDTHCNGKGAKCLRGKGPLKLSWFSKANYSHGEAAS 66
Query: 682 MEYNLKRKCSKYFKLRLIK 738
+EY +K++ +K KL++IK
Sbjct: 67 LEYTIKKQ-TKKVKLQIIK 84
>UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6;
Enterobacteriaceae|Rep: UPF0213 protein ECA0725 -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 103
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y+LR G LYTGIT++++RR+ QH +GAK LR L LV+H A D A +
Sbjct: 10 WYLYMLRTVAGALYTGITTDVSRRMNQHQAGKGAKALRGKGELTLVFH-CLAGDRSNALK 68
Query: 682 MEYNLKRKCSKYFKLRLIK 738
+EY +K + SK K RL++
Sbjct: 69 LEYRIK-QLSKSQKERLVQ 86
>UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 309
Score = 63.3 bits (147), Expect = 6e-09
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Frame = +2
Query: 5 VESRRFPHINMINDLINAVIDDLFAGG--GDYYHYVLNEKNRARIMSLKENVAFL--APL 172
V R +N+ ND+ N +++D+ G G + + +L + ++ ++N+A+L APL
Sbjct: 179 VADRSNQRLNVCNDVFNNLVEDVLFGSHNGYFINSILKNDLKGKVYKFRDNIAYLVNAPL 238
Query: 173 SASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQN 352
+ S N++ + + A AG + + S AH T Q+SLTELAF+N
Sbjct: 239 TLSTNVYMLIEKAAINAGHHAAD-------EKMYEEIVSNTAHRT-TPIQESLTELAFEN 290
Query: 353 ETLRRFIFQQIN 388
E LRR + Q +N
Sbjct: 291 EALRRGLIQDLN 302
>UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Desulfuromonas acetoxidans DSM 684
Length = 86
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W VYI+R + LYTGIT++L RR QH++ +GA+ R + +VYH S ++ +A+R
Sbjct: 6 WLVYIIRCRDNSLYTGITTDLERRFAQHASGRGARYFRGHEPIEVVYHE-SGHNRSSASR 64
Query: 682 MEYNLKRKCSKYFKLRLIKAXTT 750
E +K K K RL++ TT
Sbjct: 65 REAAIK-KLKTEDKWRLVRKKTT 86
>UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum
granulovirus|Rep: ORF75 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 97
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +1
Query: 490 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK 669
++K W +Y+++ + LYTG++ +++RR + H + +GAK LRN L+LVY S + +
Sbjct: 4 SDKSWELYMVQTPHQMLYTGVSVDVDRRFRLHCSGRGAKFLRNKQPLQLVYRSKCRFTHS 63
Query: 670 TAARMEYNLKRKCSKYFKLRLI 735
A +EY +K+ C K KL LI
Sbjct: 64 EALVVEYRVKKWC-KSKKLLLI 84
>UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22;
Enterobacteriaceae|Rep: UPF0213 protein yhbQ -
Salmonella typhimurium
Length = 100
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++R + LYTGIT+++ RR +QH +GAK LR L L + +A D A R
Sbjct: 4 WYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAF-AAQVGDRSLALR 62
Query: 682 MEYNLKRKCSKYFKLRLIKAXTTFVA 759
+EY +K + +K K RL+ F A
Sbjct: 63 IEYRIK-QLTKRQKERLVTEREAFEA 87
>UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI
domain; n=1; Hahella chejuensis KCTC 2396|Rep: Predicted
endonuclease containing a URI domain - Hahella
chejuensis (strain KCTC 2396)
Length = 105
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
WCVY+L + LYTGIT+N +R + H GAK R +RL+Y + +D +A+R
Sbjct: 11 WCVYMLLVSDNSLYTGITNNPAKRFRDHLQGSGAKYFRGRKPVRLLY-AEVGHDRASASR 69
Query: 682 MEYNLKRKCSKYFKLRLIK 738
E +K K + KLRLI+
Sbjct: 70 REIEIK-KLKRSGKLRLIE 87
>UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2;
Aeromonas|Rep: Endo/excinuclease domain protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 136
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++R +G LYTGI+++ RR++QH + +G++ LR L L + A + A R
Sbjct: 19 WFIYMVRTASGLLYTGISTDPLRRLRQHQSGKGSRALRGKGPLTLAWQQAVG-EKGAALR 77
Query: 682 MEYNLKRKCSKYFKLRLIKAXTTFVA 759
+EY LK++ SK FK +L+ ++A
Sbjct: 78 LEYRLKQQ-SKAFKEQLLTQPERWLA 102
>UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3;
Nucleopolyhedrovirus|Rep: Glycoprotein 41 - Neodiprion
sertifer NPV
Length = 312
Score = 56.8 bits (131), Expect = 5e-07
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +2
Query: 23 PHINMINDLINAVIDDLFAGGG--DYYHYVLNEKNRARIMSLKENVAFLAPLSAS--ANI 190
P I++ D++N V+ F +YY +L + I + KENV + PL A I
Sbjct: 195 PKISLFIDIVNDVVTSAFTTDSYDNYYDVLLKPQLATLINNFKENVNYFVPLGAKHRMTI 254
Query: 191 FNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRF 370
F + A+LAT AGK+ S F F + +LT++ C L+E A NE LRR
Sbjct: 255 FEWAAQLATSAGKKRSPFVLPDFKKN---------TNLTQSQCNSLLSESAQYNEILRRK 305
Query: 371 IFQ 379
I Q
Sbjct: 306 IEQ 308
>UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua
NPV|Rep: Endonuclease - Ecotropis obliqua NPV
Length = 109
Score = 56.4 bits (130), Expect = 7e-07
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +1
Query: 490 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK 669
+ +++ +Y++ ++G+LY GI S++ +R +QH G+K LRN + LVY S +
Sbjct: 3 SQRLYALYLIETEHGQLYAGIASDVKKRFRQHYRSAGSKFLRN-KQINLVYFSPNFMCLS 61
Query: 670 TAARMEYNLKRKCSKYFKLRLI 735
A R+E +KR+ S FK +LI
Sbjct: 62 CALRIEKRVKRQ-SVTFKRKLI 82
>UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29;
Gammaproteobacteria|Rep: UPF0213 protein VC_A0739 -
Vibrio cholerae
Length = 101
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W VY++R N LY GIT++++RR QH +GAK LR L LV+ A A +
Sbjct: 11 WFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGKGPLELVWSLPVADGKSAALK 70
Query: 682 MEYNLK 699
+EY +K
Sbjct: 71 LEYRIK 76
>UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Photobacterium sp. SKA34
Length = 105
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHS-NKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
W VY++R + LY G+T+++ RR +H +K+GAK L+ L L + S ++ + A
Sbjct: 12 WYVYLIRTSSNTLYCGVTTDIERRFAEHQHSKKGAKYLKGKGPLTLAW-SQKVFNKRDAM 70
Query: 679 RMEYNLKRKCSKYFKLRLIKAXT 747
EY +K +K K +LIK T
Sbjct: 71 VFEYKIKNTLTKASKEQLIKINT 93
>UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep: Excinuclease
ABC C subunit domain protein - Parvibaculum
lavamentivorans DS-1
Length = 96
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
K W VYIL G+LYTGIT ++ R K H++ +GAK R+ RLV+ A D A
Sbjct: 7 KPWYVYILECTGGRLYTGITVDVPMRYKAHASGKGAKFTRSYRPERLVFQQAFV-DRAAA 65
Query: 676 ARMEYNLKR 702
A+ EY +K+
Sbjct: 66 AKAEYAIKQ 74
>UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular
organisms|Rep: UPF0213 protein DP2720 - Desulfotalea
psychrophila
Length = 110
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
W VYI++ +G LYTGIT+N+ RRI +H S+ +GA+ R+ + LVY + D A+
Sbjct: 14 WFVYIVQCADGTLYTGITTNIARRITEHNSSAKGARYTRSRRPVMLVYRE-TCRDRSEAS 72
Query: 679 RMEYNLKRKCSKYFKLRLIKA 741
+ EY +K + S K L+KA
Sbjct: 73 KREYAIK-QLSPTRKRTLVKA 92
>UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 105
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
+W +Y++ G YTGIT+++ RR KQH + +GAK LR T L+LV+ S A+
Sbjct: 3 IWFIYLIETPIGHWYTGITTDVERRFKQHQSGKGAKNLRGKTPLKLVF-STPVGTRSEAS 61
Query: 679 RMEYNLK 699
++E +K
Sbjct: 62 KLEAKIK 68
>UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 88
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQH---SNKQGAKCLRNATNLRLVYHSASAYDY 666
K W +YI+ ++GKLYTGIT++++RR +H +N +GAK R+ +VY + D
Sbjct: 5 KTWWLYIVETESGKLYTGITTDVDRRFHEHFDKNNSRGAKFFRSDPAKAVVY-TEPCVDR 63
Query: 667 KTAARMEYNLKRKCSKYFKLRLI 735
A++ EY +K K S+ K ++I
Sbjct: 64 ADASKREYVVK-KMSRLKKTQMI 85
>UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: UPF0213
protein DVU_3309 - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 110
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 493 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKT 672
++VW VY+LR +G LY G+T+N+ RR+ QH +GA+ R L+ H A
Sbjct: 7 DEVWFVYLLRCADGTLYCGVTNNIERRLTQHHRGRGARYTRGRAPFILLGH-APFPGRGE 65
Query: 673 AARMEYNLKRK 705
A R+EY +KR+
Sbjct: 66 AQRVEYRIKRQ 76
>UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Moritella sp. PE36|Rep: Excinuclease ABC, C
subunit, N-terminal - Moritella sp. PE36
Length = 87
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
+W VY++ D G LY GIT+++ RR +QH GAK R A +R+ Y D A+
Sbjct: 6 LWIVYLIETDAG-LYCGITTDMERRYQQHCKGTGAKFFRRAKPIRIAYTEIQP-DRSRAS 63
Query: 679 RMEYNLKRKCSKYFKLRLIKA 741
+ EY +K+ K KL LI +
Sbjct: 64 KREYAIKQLPRKQ-KLALINS 83
>UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11;
Vibrionales|Rep: UPF0213 protein VPA1222 - Vibrio
parahaemolyticus
Length = 106
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK-TAA 678
W VY++R + LY G+T+++ RR KQH +GAK L+ L L + ++++D K TA
Sbjct: 9 WSVYLIRNNRNALYCGVTNDIERRFKQHQLGKGAKALKGKGPLVLEW--STSFDSKVTAM 66
Query: 679 RMEYNLKR 702
R EY +K+
Sbjct: 67 RAEYFIKQ 74
>UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 120
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKT 672
VW VY++R LY G+T++++RR ++H ++K+GA+ LR L L++H D +
Sbjct: 27 VWSVYLIRTRLNTLYAGVTTDVDRRFQEHASNSKKGARYLRGKGPLALMWHQEIG-DKRE 85
Query: 673 AARMEYNLKRKCSKYFKLRLIKAXTT 750
A +EY +K + + KL LI T
Sbjct: 86 AMSLEYKIK-QIDRKKKLSLIHGSLT 110
>UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;
n=2; Photobacterium profundum|Rep: Putative
uncharacterized protein C3908 - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 116
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
+W VY++R + LY G+T+++ RR +H S K+GAK L+ L L +H D + A
Sbjct: 28 IWSVYLIRTVSNTLYCGVTTDVQRRYSEHQSGKKGAKYLKGKGPLTLAWHE-EVGDKRLA 86
Query: 676 ARMEYNLKR 702
++EY +K+
Sbjct: 87 MQIEYRIKQ 95
>UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2;
Alteromonadales|Rep: Putative uncharacterized protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 104
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
+W +YI++ G YTGIT+N+ +R+ H GAK L+ L L+ H S + A+
Sbjct: 22 IWYLYIVQTRYGHWYTGITTNVEQRLATHQAGNGAKNLKGKGPLLLI-HQHSVGNKSAAS 80
Query: 679 RMEYNLKR 702
++EY +K+
Sbjct: 81 KLEYQVKK 88
>UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain
protein; n=2; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 107
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +YI+R N LYTGIT+++ RR +H S + AK L+ L LVY + A D A
Sbjct: 19 WYLYIIRCANSHLYTGITTDIARRFAEHQASGPKAAKYLKGKGPLTLVYQESLA-DRSEA 77
Query: 676 ARMEYNLKRKCSKYFKLRLIK 738
++ E +K K ++ KL LI+
Sbjct: 78 SKREITVK-KYTRQQKLLLIE 97
>UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 97
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++R G+LYTGIT+++ RR+ +H + +GAK LR L L + + + A +
Sbjct: 12 WSLYMIRCKGGQLYTGITTHVERRLAEHQSGKGAKFLRGKGPLVLAF-QRNIGSHSEALK 70
Query: 682 MEYNLKRKCSKYFKLRLI 735
E +K K +K K R+I
Sbjct: 71 TEAAIK-KMAKADKERII 87
>UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Marinomonas sp. MWYL1|Rep: Excinuclease ABC C
subunit domain protein - Marinomonas sp. MWYL1
Length = 112
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +Y+++ LYTGI+++++RR K+HS +K+GA+ L+ L LV+H S A
Sbjct: 16 WSLYMIKTRLNTLYTGISTDVDRRFKEHSGVSKRGARYLKGKGPLELVWHQ-SVGSKSDA 74
Query: 676 ARMEYNLKRKCSKYFKLRLIKAXTTFVA 759
+E+ +K K ++ KL LI+ A
Sbjct: 75 LVLEHKVK-KLNRRQKLSLIEGKIDLTA 101
>UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 102
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +Y++R +G+LYTGIT+++ RR +HS +K+G+K LR L LV A
Sbjct: 17 WFLYLIRCKHGRLYTGITTDVERRFAEHSSDDKKGSKYLRGKAPLTLVLKKKIG-SRSIA 75
Query: 676 ARMEYNLKR 702
+ME +K+
Sbjct: 76 LKMEARVKK 84
>UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain
protein; n=12; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-7)
Length = 141
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y + A
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQE-TVGSRGDA 115
Query: 676 ARMEYNLKRKCSKYFKLRLIKA 741
R E +K K S+ KL LI++
Sbjct: 116 LRREIAVK-KLSRAQKLALIES 136
>UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15;
Pseudomonas|Rep: UPF0213 protein PA3854 - Pseudomonas
aeruginosa
Length = 104
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/87 (36%), Positives = 44/87 (50%)
Frame = +1
Query: 475 ATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSAS 654
A T K W VY++R +NG LY GI+ + RR H + +GA+ ++ LVY A
Sbjct: 6 AATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCSGKGARFFHSSPARALVYVEAC 65
Query: 655 AYDYKTAARMEYNLKRKCSKYFKLRLI 735
A A R E +K SK K RL+
Sbjct: 66 A-SKGDALRRERAIK-ALSKRAKERLL 90
>UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Saccharophagus degradans 2-40|Rep: Excinuclease
ABC, C subunit-like protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 106
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSN-KQGAKCLRNATNLRLVYHSASAYDYKTAA 678
W VYIL+ +G YTG+T ++ RR+ +H++ K GAK R +++VY S + D A
Sbjct: 12 WQVYILQCADGSYYTGVTVDIARRVHEHNHAKLGAKYTRARRPVKVVY-SEACIDRSAAC 70
Query: 679 RMEYNLKRKCSKYFKLRLIKAXTTFV 756
+ E +K K + K+ LI + + V
Sbjct: 71 KREAAIK-KLPRSAKVALIASQSNEV 95
>UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-4)
Length = 139
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y A
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQE-QVGTRSDA 115
Query: 676 ARMEYNLKRKCSKYFKLRLIKA 741
+ E +K K S+ KL LI++
Sbjct: 116 LKREIAVK-KLSRSQKLALIES 136
>UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain
protein; n=4; Proteobacteria|Rep: Excinuclease ABC, C
subunit domain protein - Geobacter bemidjiensis Bem
Length = 93
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W VYI+ +G YTGIT+++ RR++QH+ GAK R +++ +D +A+R
Sbjct: 3 WQVYIILCSDGTFYTGITTDIARRLRQHATGSGAKYFRGRRPEEVLF-LEGGHDRSSASR 61
Query: 682 MEYNLK 699
E +K
Sbjct: 62 RELYIK 67
>UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_00865;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00865 - Methylophilales
bacterium HTCC2181
Length = 102
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W VYIL+ + LYTGIT+N+++RI+ H GAK + + +L++ + + +A++
Sbjct: 25 WFVYILKCSDDTLYTGITNNVSKRIEDHEKGVGAKYTKGRSPFQLLF-TEKHPNRSSASK 83
Query: 682 MEYNLKRKCSKYFKLRL 732
E +K SK KL L
Sbjct: 84 REIEIK-AFSKIEKLAL 99
>UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2;
Cystobacterineae|Rep: Excinuclease ABC, C subunit-like -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 103
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W VY+LR +G LY G T++L R+ +H+ +GA+ R+ + LV+ A D A R
Sbjct: 17 WWVYLLRCGDGSLYAGATNDLAARVARHAAGRGARYTRSRLPVELVWRE-RADDRGAALR 75
Query: 682 MEYNLKR 702
E LKR
Sbjct: 76 REAALKR 82
>UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n=1;
Shewanella amazonensis SB2B|Rep: Endonuclease containing
a URI domain - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 106
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKT 672
+W +YI+R G+LYTG+T+N+ RR +H + AK LR L LVY +
Sbjct: 4 IWQLYIIRCATGELYTGVTTNVARRFDEHQCGGARAAKYLRGRGPLTLVYQE-NVGSRGD 62
Query: 673 AARMEYNLKRKCSKYFKLRLI 735
A R E +K K SK K LI
Sbjct: 63 ALRRELAVK-KLSKAAKEALI 82
>UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4;
Pseudomonadaceae|Rep: Excinuclease ABC, C subunit-like -
Pseudomonas putida W619
Length = 94
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
K W VY++R NG LY GI+ + RR H QGA+ + + LVY + K
Sbjct: 11 KPWYVYLVRAANGSLYCGISDDPQRRFVAHQKGQGARYFKTSPAQALVY--VEQWPDKGE 68
Query: 676 ARMEYNLKRKCSKYFKLRLIKAXTT 750
A + L +K K K L+ + T+
Sbjct: 69 ALRQERLVKKLRKAAKEALVASYTS 93
>UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11;
Bacteria|Rep: UPF0213 protein BH0048 - Bacillus
halodurans
Length = 94
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK-TAARM 684
VYIL +G YTG T++++RRIK+H++ +GAK R RLV + A+ K A R
Sbjct: 5 VYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLV--ATWAFPSKEEAMRW 62
Query: 685 EYNLK 699
EY +K
Sbjct: 63 EYEVK 67
>UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Hypothetical
URI domain endonuclease - Alteromonas macleodii 'Deep
ecotype'
Length = 118
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +1
Query: 493 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSN--KQGAKCLRNATNL--RLVYHSASAY 660
N W +Y++ G+LYTGIT+ RRI QH K GAK L+ + L R V+ A+
Sbjct: 21 NTQWYLYLIENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPLVFRAVFEVANKS 80
Query: 661 DYKTAARMEYNLKR 702
+ A+++EY +K+
Sbjct: 81 E---ASKLEYAVKK 91
>UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_20122;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_20122 - alpha proteobacterium HTCC2255
Length = 100
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKT 672
+W VYI+ G YTG+T ++ RR +HS +GAK L+ L L+ + D +T
Sbjct: 4 IWSVYIIENKLGHWYTGVTVDVARRFAEHSAGGVKGAKALKGKGPLTLI-SAYDCPDKQT 62
Query: 673 AARMEYNLKRK 705
A ++EY +K++
Sbjct: 63 AYQLEYWIKQQ 73
>UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI
domain; n=2; Alteromonadales|Rep: Predicted endonuclease
containing a URI domain - Idiomarina loihiensis
Length = 83
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W VY+++ + YTG+T+++ RR+ +H+ +K+GAK R + LV+ S + A
Sbjct: 3 WAVYLIKCADNTFYTGVTTDIERRVNEHNTDDKKGAKYTRARRPVALVW-SEEHPNRTKA 61
Query: 676 ARMEYNLKR 702
+ EY +KR
Sbjct: 62 CQREYEIKR 70
>UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 114
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 690
YI++ + LYTG T++LN+RIK H++ +GAK + ++LVY+ + +R EY
Sbjct: 5 YIVKCADSTLYTGWTNDLNKRIKAHNSGKGAKYTKTRRPVKLVYYEEHETKNEAMSR-EY 63
Query: 691 NLKRKCSK 714
+K K
Sbjct: 64 AIKHLTRK 71
>UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Reinekea sp. MED297|Rep: Excinuclease ABC, C
subunit-like protein - Reinekea sp. MED297
Length = 94
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVYHSASAYDYKTA 675
W VY ++ +G YTGIT++ +RR++QH+ + GA+ + + LV++ A
Sbjct: 9 WWVYFVQCADGTFYTGITTDPHRRLRQHNGELVGGARYTASRRPVTLVFYEPHP-SRSDA 67
Query: 676 ARMEYNLKRKCSKYFKLRLIK 738
AR EY L RK S+ KL I+
Sbjct: 68 ARAEYRL-RKLSRKQKLARIE 87
>UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8;
Streptococcus agalactiae|Rep: UPF0213 protein SAG0778 -
Streptococcus agalactiae serotype V
Length = 88
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 687
+Y+L +G LYTG T+++ RR+ H+ +GAK R ++L+Y + A++ K A
Sbjct: 8 MYVLECSDGTLYTGYTTDVKRRLNTHNTGKGAKYTRARLPVKLLY--SEAFNSKQEAMRA 65
Query: 688 YNLKRKCSKYFKLRLIK 738
L ++ ++ KL IK
Sbjct: 66 EALFKQKTRQAKLTYIK 82
>UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;
Betaproteobacteria|Rep: Endo/excinuclease domain protein
- Burkholderia mallei (Pseudomonas mallei)
Length = 298
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++ +G +YTGIT+++ R +H+ GA+ R A R V S D +A+R
Sbjct: 3 WYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTR-ARKPRAVLASFELADRSSASR 61
Query: 682 MEYNLKR 702
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6;
Lactobacillus|Rep: UPF0213 protein lp_2058 -
Lactobacillus plantarum
Length = 101
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC--LRNATNLRLVYHSASAYDYK 669
K + Y+L + LY G T NL RR+ H+ +GAK +R+ L+L+YH D
Sbjct: 15 KKYYFYVLLCADQTLYGGFTDNLQRRLATHNAGKGAKYTRVRSRRPLQLIYHETFT-DKS 73
Query: 670 TAARMEYNLKRKCSKYFKLRLIKA 741
+A + EY K + S+ KL+ + A
Sbjct: 74 SALKAEYAFKHQ-SRAAKLKYLSA 96
>UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 79
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 514 ILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 690
+L+ + LYTGIT +L+RR+ +H S+++ AK R L ++Y D +A++ E
Sbjct: 1 MLKCSDDTLYTGITIDLSRRLNEHNSSQKAAKYTRTRRPLEMIYFEEHK-DKSSASKREL 59
Query: 691 NLKRKCSKYFKLRLIK 738
+K K S+ KL LIK
Sbjct: 60 EIK-KLSRDKKLELIK 74
>UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Excinuclease ABC, C subunit, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 107
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 484 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYD 663
L K++ VY+L + GK+Y G TSN+ R H K+ K R RLVY+ A D
Sbjct: 18 LEEGKMYYVYVLANEKGKIYIGYTSNIKERYLAHQRKE-VKSTREG-KWRLVYYEAYR-D 74
Query: 664 YKTAARMEYNLKR 702
K A E +LK+
Sbjct: 75 KKDALIREKHLKK 87
>UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: Excinuclease ABC, C
subunit-like - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
W +YI+ YTGI +L++R QH S + AK LR L+++Y + D+ A
Sbjct: 59 WFLYIIENKYQHYYTGICKDLSKRFAQHNSSGRLCAKALRGKGPLKMIY-AVELVDHSDA 117
Query: 676 ARMEYNLKRKCSKYFKLRLI 735
+ME +K K +K K++L+
Sbjct: 118 LKMELWVK-KLTKAKKVQLV 136
>UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7;
Proteobacteria|Rep: UPF0213 protein XCC3072 -
Xanthomonas campestris pv. campestris
Length = 102
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
K W +Y+L NG Y GIT++L RR + H GA+ R L+ V S D TA
Sbjct: 5 KPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQ-VLASHPYPDRATA 63
Query: 676 ARMEYNLKRK 705
+R E+ LK++
Sbjct: 64 SRAEWLLKQQ 73
>UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular
organisms|Rep: UPF0213 protein SH2523 - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 82
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 687
VYI++ + LYTG T+N+ RI H+ +GAK + + LVY + A R E
Sbjct: 6 VYIVKCKDNSLYTGYTTNVEARIATHNAGKGAKYTKTRRPVVLVYQEMFS-SKSEAMRRE 64
Query: 688 YNLKRKCSKYFKLRLIK 738
Y +K S+ KL++I+
Sbjct: 65 YEIK-TFSRQQKLKMIE 80
>UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Chromohalobacter salexigens DSM 3043|Rep:
Excinuclease ABC, C subunit-like protein -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 99
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAA 678
W +Y++ G LYTG+T+++ RR ++H K+GA+ LR L L H+ + A
Sbjct: 13 WYLYLVETAAGALYTGVTTDVARRFREHRDGKRGARALRGKGPLTL-RHAEYVGGHGEAL 71
Query: 679 RMEYNLKR 702
R E LK+
Sbjct: 72 RQEAALKK 79
>UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 130
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 469 IMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 648
+ ++ + W +Y+L NG +YTGI ++ R K H +GA+ R+ RL+ +
Sbjct: 20 VQKLSILSAMTWFLYLLECRNGSIYTGIAVDVQARYKAHMAGKGARYTRSNPPRRLL--A 77
Query: 649 ASAY-DYKTAARMEYNLKR 702
Y D +A++ EY +KR
Sbjct: 78 VLEYPDRSSASKAEYAMKR 96
>UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cydia
pomonella granulovirus|Rep: ORF65 similar to AcMNPV
ORF79 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 79
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 606
WCVY++R +G LYTG+++N++RR H +GA+
Sbjct: 7 WCVYMVRTPDGALYTGMSNNVHRRFVTHCIGRGAR 41
>UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF121 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 159
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/80 (31%), Positives = 45/80 (56%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
+++ +YI+R LYTG+++N+ RR++QH + + + L LVY S A
Sbjct: 57 RLYALYIIRTSKNTLYTGVSTNVVRRLQQHRSGRASLNGGGKGPLLLVYQSEYFMCASCA 116
Query: 676 ARMEYNLKRKCSKYFKLRLI 735
R+E +KR+ S+ K ++I
Sbjct: 117 IRLEKLVKRQ-SRLVKEQMI 135
>UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3;
cellular organisms|Rep: GIY-YIG catalytic domain,
putative - Salinibacter ruber (strain DSM 13855)
Length = 100
Score = 42.7 bits (96), Expect = 0.010
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA-RM 684
VY++ +G YTG T+++ RR+++H+ AK R + LV+ YD ++AA +
Sbjct: 17 VYVIECRDGTYYTGYTTDVERRVEEHNEGTAAKYTRGRRPVTLVH--VETYDSQSAAMQR 74
Query: 685 EYNLKRKCSKYFKLRLIKAXT 747
EY +K + + K RL++ T
Sbjct: 75 EYAIK-QLRRREKERLVQNGT 94
>UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Clostridiales|Rep: Excinuclease ABC, C
subunit domain protein - Desulfotomaculum reducens MI-1
Length = 88
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
+ VYIL+ + LYTGIT++L RR++QH + +K R ++LVY Y A
Sbjct: 5 YVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGE-YTKGQALT 63
Query: 682 MEYNLKRKCSKYFKLRLI 735
E +K K ++ K+ LI
Sbjct: 64 RELAIK-KLNRQQKMDLI 80
>UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter
violaceus|Rep: Gll0731 protein - Gloeobacter violaceus
Length = 118
Score = 42.3 bits (95), Expect = 0.013
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 687
VY++R NG LY G T++L R++ H++ +GA+ +R A RL S D A R+E
Sbjct: 5 VYLVRCRNGALYCGQTADLEARLRLHASGKGARSVRMAGFDRLA-ASWPVADRSAALRLE 63
Query: 688 YNLKR 702
+KR
Sbjct: 64 AAIKR 68
>UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Ralstonia metallidurans CH34|Rep: Excinuclease ABC,
C subunit-like protein - Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839)
Length = 98
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 639
W +Y+L + +YTGIT+++ RR QH GAK R+ LRL+
Sbjct: 15 WFLYLLECEGESIYTGITTDVQRRYAQHRAGTGAKYTRSRRPLRLL 60
>UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9;
Burkholderiaceae|Rep: Excinuclease ABC, C subunit-like -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 289
Score = 41.9 bits (94), Expect = 0.017
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++ + +YTGIT+++ R +H++ +GA+ R + R V S D +A+R
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTR-SRKPRAVLASFPLPDRSSASR 61
Query: 682 MEYNLKR 702
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain
protein; n=1; Burkholderia vietnamiensis G4|Rep:
Excinuclease ABC, C subunit domain protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 261
Score = 41.9 bits (94), Expect = 0.017
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y++ + +YTGIT+++ R +H++ +GA+ R + R V S D +A+R
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTR-SRKPRAVLASFPLPDRSSASR 61
Query: 682 MEYNLKR 702
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_Q9DVU6 Cluster: PxORF87 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF87 peptide - Plutella xylostella
granulovirus
Length = 283
Score = 41.5 bits (93), Expect = 0.022
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +2
Query: 26 HINMINDLINAVIDDLFAG--GGDYYHYVLNEKNRARIMSLKENVAFL--APLSASANIF 193
++ + + + +++DL G G Y + L+ + M ++N+ FL APL+ S +++
Sbjct: 165 NLKFVRGVFDKLVEDLLTGRYSGYYLKHCLSTGTLNKAMRFRDNITFLLDAPLTLSTDMY 224
Query: 194 NYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRFI 373
+ + A + + P +A A ++V P + L Q L L+F+NETLRR
Sbjct: 225 SLIERAAAK--RNPERDYSA-----ALDSVVYPQSTL-----QQMLNYLSFENETLRRDR 272
Query: 374 FQQIN 388
Q +N
Sbjct: 273 IQNLN 277
>UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain protein;
n=14; Bacteria|Rep: Excinuclease ABC C subunit domain
protein - Roseiflexus castenholzii DSM 13941
Length = 107
Score = 40.3 bits (90), Expect = 0.051
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 VYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
VYIL N K +Y G+T+NL RRI +H NK + +LVY+ + Y AR
Sbjct: 8 VYILTNWNNKVMYIGMTNNLERRIYEHKNKMVDGFTKKYNVNKLVYYEHTTDVYAAIARE 67
Query: 685 EYNLKRKCSKYFKL 726
+ K + K KL
Sbjct: 68 KEIKKWRREKKNKL 81
>UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3;
Burkholderiales|Rep: Putative uncharacterized protein -
Herminiimonas arsenicoxydans
Length = 100
Score = 40.3 bits (90), Expect = 0.051
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W +Y+L +G +YTGI ++ R H +GA+ R+ RL+ A D A++
Sbjct: 3 WFLYLLECRDGSIYTGIAVDVAARYAAHEKGKGARYTRSHPPRRLLAVIEYA-DRSAASK 61
Query: 682 MEYNLKR 702
EY +KR
Sbjct: 62 AEYEMKR 68
>UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS0034;
n=9; Bacillus|Rep: UPF0213 protein
BA_0032/GBAA0032/BAS0034 - Bacillus anthracis
Length = 96
Score = 40.3 bits (90), Expect = 0.051
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 505 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
C Y++ +G Y G T+++ +RI H++ +GAK R + L Y D +TA +
Sbjct: 7 CFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHE-DKRTAMQA 65
Query: 685 EYNLKR 702
EY K+
Sbjct: 66 EYYFKQ 71
>UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain
protein; n=5; Flavobacteriales|Rep: Excinuclease ABC, C
subunit domain protein - Flavobacterium johnsoniae UW101
Length = 107
Score = 39.9 bits (89), Expect = 0.067
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR-NATNLRLVYHSASAYDYKT 672
K + VYIL+ + YTG T+N+ RR+ +H++ +C N L LV++ A D
Sbjct: 2 KRYYVYILKCSDNSYYTGFTNNIERRLNEHNSGINKECYTFNKRPLELVFY-AEFNDVHQ 60
Query: 673 AARMEYNLK 699
A E +K
Sbjct: 61 AIAFEKQVK 69
>UniRef50_Q4UMD7 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=7; Proteobacteria|Rep: Excinuclease ABC, C subunit,
N-terminal - Rickettsia felis (Rickettsia azadi)
Length = 90
Score = 39.5 bits (88), Expect = 0.089
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W + +G LY GIT+N+ RR +H K K + N+ + ++ D K A
Sbjct: 3 WVYILCSNKHGTLYIGITNNIIRRAYEHKQKI-IKGFTSKYNIIKLVYTEEFTDIKEALT 61
Query: 682 MEYNLKRKCSKYFKLRLIK 738
E NLK K + +K+ LI+
Sbjct: 62 REKNLK-KWKRNWKIELIE 79
>UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3;
Lactobacillales|Rep: UPF0213 protein in ldhD 5'region -
Pediococcus acidilactici
Length = 98
Score = 39.5 bits (88), Expect = 0.089
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTAARM 684
Y+L + LYTG T NL +R+ +H++ QGAK R ++L+Y+ S + A
Sbjct: 12 YVLWCADQTLYTGYTVNLKQRVARHNSGQGAKYTRVPKRRPVQLLYYE-SFENQHDAMSA 70
Query: 685 EYNLKRKCSKYFKLRLIK 738
EY K++ S+ KL+ +K
Sbjct: 71 EYFFKKQ-SRKEKLKYLK 87
>UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73;
Bacilli|Rep: UPF0213 protein SP_1535 - Streptococcus
pneumoniae
Length = 99
Score = 39.5 bits (88), Expect = 0.089
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 687
+Y+L +G Y G T+++ RR+ H++ +GAK R ++L+Y A + A E
Sbjct: 7 MYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFA-SKEEAMSAE 65
Query: 688 YNLKRK 705
LKRK
Sbjct: 66 ALLKRK 71
>UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1;
Caulobacter sp. K31|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 122
Score = 39.1 bits (87), Expect = 0.12
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
VYIL + G LY G+TS+L+RR+ +H G+ R RLVY+ D A
Sbjct: 32 VYILASKPYGTLYIGVTSDLSRRVWEHREGLGSLFCRKYGVHRLVYYE-EFDDISLAIHR 90
Query: 685 EYNLKRKCSKYFKLRLIKA 741
E LK + +K+ LI+A
Sbjct: 91 EKRLKH-YPRRWKINLIEA 108
>UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Excinuclease ABC,
C subunit-like protein - Plesiocystis pacifica SIR-1
Length = 95
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLR 615
W +Y+LR +G+ Y GIT +L RR+ QH+ + GAK R
Sbjct: 20 WWLYLLRSASGRSYVGITVDLERRLAQHNGELPGGAKSTR 59
>UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus
lactis|Rep: UPF0213 protein ysiG - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 104
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKT-AARME 687
YIL+ + LY G T++L +R+ H++ +GAK + ++L+ ++ +D K A E
Sbjct: 7 YILQCSDKTLYCGYTTDLEKRLATHNSGKGAKYTKTRLPVKLL--ASVDFDNKNDAMSCE 64
Query: 688 YNLKRKCSKYFKLRLIK 738
+ K K + KL LIK
Sbjct: 65 WWFKHKLVRKQKLSLIK 81
>UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protein;
n=2; Novosphingobium aromaticivorans DSM 12444|Rep:
Excinuclease ABC, C subunit-like protein -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 118
Score = 38.3 bits (85), Expect = 0.21
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 681
W + + G +Y G+TS+L RR+ QH G+ + + RLVY A ++ A
Sbjct: 16 WVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVY--AERHEEIEPAI 73
Query: 682 MEYNLKRKCSKYFKLRLIKA 741
L +K + +K LI+A
Sbjct: 74 AREKLVKKWRREWKFALIEA 93
>UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1;
papaya bunchy top disease rickettsia|Rep: Putative
uncharacterized protein - papaya bunchy top disease
rickettsia
Length = 109
Score = 38.3 bits (85), Expect = 0.21
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 496 KVWCVYILRQ-DNGKLYTGITSNLNRRIKQHSNK 594
K + VYIL NG LY GITSN+ RRI +H NK
Sbjct: 44 KQYYVYILASIRNGTLYIGITSNIIRRICEHKNK 77
>UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Chlorobium phaeobacteroides BS1|Rep: Excinuclease
ABC, C subunit, N-terminal - Chlorobium phaeobacteroides
BS1
Length = 84
Score = 38.3 bits (85), Expect = 0.21
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 VWCVYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
++ VY+LR + Y G TS+L+RRI +H N+ +K + L LVY+ A
Sbjct: 1 MYYVYVLRSKKDEHYYIGYTSDLDRRIDEH-NQGFSKSTAHRRPLELVYYEACRSSKDAM 59
Query: 676 ARMEYNLKRKCSKYFKLRL 732
R +Y +Y K RL
Sbjct: 60 HREKYLKSTYGHRYLKNRL 78
>UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Stenotrophomonas maltophilia R551-3
Length = 174
Score = 38.3 bits (85), Expect = 0.21
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 460 HCIIMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 639
H MA++L + W +Y+L +G Y GI+++++ R H +GA+ R LR++
Sbjct: 83 HNPAMASSL---RPWFLYLLECRDGSYYAGISTDVDARFAAHQAGKGARYTRARPPLRVL 139
Query: 640 YHSASAY-DYKTAARMEYNLKRK 705
+ Y D A+R E+ LK++
Sbjct: 140 --AVREYPDRAAASRAEWQLKQQ 160
>UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus
oeni|Rep: Methyltransferase - Oenococcus oeni ATCC
BAA-1163
Length = 346
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 484 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN--LRLVY 642
L+ NK + Y+++ + LY G + ++NRR H K+GAK R A L+LVY
Sbjct: 262 LHDNKYF-FYVIQTADNYLYAGTSDDVNRRFATHQAKKGAKFTRAAIRHPLKLVY 315
>UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease
containing a URI domain; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG2827: Predicted
endonuclease containing a URI domain - Magnetospirillum
magnetotacticum MS-1
Length = 82
Score = 37.5 bits (83), Expect = 0.36
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 675
K W VY+L YTGI ++ R+ +H+ +GAK R RL H + A
Sbjct: 2 KDWFVYVLLNGAHIAYTGIALDVEDRLARHNAGEGAKFTRGRGPWRLA-HVEGPLSHGDA 60
Query: 676 ARMEYNLKR 702
R E +KR
Sbjct: 61 LRREMAIKR 69
>UniRef50_Q4FLX0 Cluster: Excinuclease ABC; n=2; Candidatus
Pelagibacter ubique|Rep: Excinuclease ABC - Pelagibacter
ubique
Length = 83
Score = 37.5 bits (83), Expect = 0.36
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +1
Query: 535 KLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEYNLKRKCSK 714
K Y G T+NL R+ +H++ GAK + + L+Y S D K A EY LK +K
Sbjct: 17 KTYVGYTNNLELRLNKHNSNNGAKATKGYKWI-LIY-SKKFRDKKEAMSFEYKLKN--NK 72
Query: 715 YFKLRLIK 738
+ L+K
Sbjct: 73 NLRKELLK 80
>UniRef50_Q3STS6 Cluster: Excinuclease ABC, C subunit; n=3;
Rhizobiales|Rep: Excinuclease ABC, C subunit -
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 110
Score = 37.5 bits (83), Expect = 0.36
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 690
++ + NG LY G+T++L RR+ +H + A + RLVY + D + A + E+
Sbjct: 23 FLTNRPNGILYVGVTNDLVRRVFEHRSGFVAGFTKRHCLKRLVYFE-TFDDIRNAIQREH 81
Query: 691 NLKRKCSKYFKLRLIKA 741
N+K + +K+R I A
Sbjct: 82 NIKH-WPRTWKVRTIVA 97
>UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium
difficile 630|Rep: Putative endonuclease - Clostridium
difficile (strain 630)
Length = 103
Score = 37.5 bits (83), Expect = 0.36
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRL-VYHSASAYDYKTA 675
++ YI+R + LYTG TSN+ RR+ +H +K R +L VY + A
Sbjct: 1 MYFTYIIRCKDDSLYTGYTSNIVRRMNEHKLGINSKYTRAKGFEKLEVYFVTNT--KSNA 58
Query: 676 ARMEYNLKRKCSKYFKLRLIK 738
++EY +K K ++ KL +IK
Sbjct: 59 MKLEYYIK-KLTRNKKLSIIK 78
>UniRef50_Q0VNB7 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 129
Score = 37.5 bits (83), Expect = 0.36
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNK-QGAKCLRNATNLRLVYHSASAYDY 666
T + W +Y+L + LYTGI++ RR+ +H+ +GA+ R +R V A D
Sbjct: 22 TMQQWWLYMLECADRSLYTGISTEPARRVHEHNTSLKGARYTRARRPVRPVL-LLPAGDR 80
Query: 667 KTAARMEYNLKRKCSKYFKLRLI 735
+A+++E +KR + +L L+
Sbjct: 81 ASASQLEARIKRLSRRDKQLLLV 103
>UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Caulobacter sp. K31
Length = 106
Score = 37.5 bits (83), Expect = 0.36
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 508 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
VYI+ Q NG LY G T +L RR+ +H G++ R LV++ D + AA
Sbjct: 16 VYIVASQRNGTLYIGSTDDLQRRVWEHKEADGSRFTRKHGCTILVWYEVC--DTREAALT 73
Query: 685 EYNLKRKCSKYFKLRLIK 738
++ + +KLR+I+
Sbjct: 74 LERRMKEWKRRWKLRVIE 91
>UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI
domain; n=1; Idiomarina baltica OS145|Rep: Predicted
endonuclease containing a URI domain - Idiomarina
baltica OS145
Length = 101
Score = 37.5 bits (83), Expect = 0.36
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVYHSASAYDYKTA 675
W VY++ + LYTG+T+ L RRI+QH+ + GA+ ++ + L + + A
Sbjct: 22 WYVYMVECGDRSLYTGVTTCLERRIRQHNGELSGGARYTQSRRPVVLSWRQ-GPFSKTRA 80
Query: 676 ARMEYNLKRKCSKYFKLRLI 735
++E LK + S+ K +LI
Sbjct: 81 CQLEAQLK-QLSRADKRKLI 99
>UniRef50_Q7T9S7 Cluster: Gp41; n=1; Adoxophyes orana
granulovirus|Rep: Gp41 - Adoxophyes orana granulovirus
(AoGV)
Length = 289
Score = 37.1 bits (82), Expect = 0.47
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 47 LINAVIDDLFAGGGDYYHY--VLNEKNRARIMSLKENVAFLAPLSASANIFNYMAELATR 220
+ N +I+D+ G + Y+ L+ + R++ K ++ +L S I + + +
Sbjct: 170 VFNKLIEDMLYGTHNNYYIEKCLSGDIKQRVLQFKSDINYLLTNEPSKIINDVYTPIREK 229
Query: 221 AGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQDSLTELAFQNETLRRFIFQQIN 388
A S+ T T+ +V H + L+ELAF+NETLRR Q++N
Sbjct: 230 AIHN-SLITTTT--TTTNQSVQQQQQHYSP--IHQQLSELAFENETLRRNKIQELN 280
>UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2;
Desulfitobacterium hafniense|Rep: Excinuclease ABC, C
subunit-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 103
Score = 37.1 bits (82), Expect = 0.47
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 499 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 615
++ VYIL + LYTG T L RRI++H+ GAK R
Sbjct: 1 MYWVYILHCADHTLYTGSTPRLERRIQEHNQGSGAKYTR 39
>UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Rhizobiales|Rep: Excinuclease ABC, C
subunit domain protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 95
Score = 37.1 bits (82), Expect = 0.47
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 505 CVYIL-RQDNGKLYTGITSNLNRRIKQH 585
CVYI+ + NG LYTG+TSN+ RR +H
Sbjct: 5 CVYIVANRRNGTLYTGVTSNMPRRAHEH 32
>UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep:
UPF0213 protein yazA - Bacillus subtilis
Length = 99
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 690
Y+++ + Y G T++L++R+K H++ +GAK + + L++ + S + A + EY
Sbjct: 9 YVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIF-AESFSTKREAMQAEY 67
Query: 691 NLKRKCSK 714
K+ K
Sbjct: 68 YFKKLTRK 75
>UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain
protein; n=17; Proteobacteria|Rep: Endo/excinuclease
amino terminal domain protein - Rickettsia felis
(Rickettsia azadi)
Length = 144
Score = 36.3 bits (80), Expect = 0.83
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 508 VYIL-RQDNGKLYTGITSNLNRRIKQHSN 591
VYI+ + NG LYTG+TSNL +RI +H N
Sbjct: 54 VYIVTNKKNGILYTGVTSNLIKRIYEHKN 82
>UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Predicted orf - Candidatus Kuenenia
stuttgartiensis
Length = 128
Score = 36.3 bits (80), Expect = 0.83
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 493 NKVWCVYIL-RQDNGKLYTGITSNLNRRIKQHSNKQ 597
+K++ +YI+ ++N LYTG+T+NL RR+ H K+
Sbjct: 50 DKLYSIYIMTNKNNTVLYTGVTNNLKRRVYWHREKR 85
>UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Shewanella sp. (strain W3-18-1)
Length = 102
Score = 36.3 bits (80), Expect = 0.83
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
VYI+ Q NG LY G+TS L +R+ QH N +LVY A Y R
Sbjct: 5 VYIMASQFNGTLYIGVTSQLEQRVWQHKNAIIDGFTHKYKVDQLVYFEAHVSMYDAICR- 63
Query: 685 EYNLKRKCSKYFKLRLIKA 741
E LK K + +K+ LI +
Sbjct: 64 EKQLK-KWRREWKIDLINS 81
>UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core
eudicotyledons|Rep: DNA mismatch repair protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1118
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 505 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQG 600
CVY++R+ + +LY G T +L RI+ H K+G
Sbjct: 1026 CVYVMRRPDKRLYIGQTDDLEGRIRAHRAKEG 1057
>UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5;
Neisseria|Rep: UPF0213 protein in glnA 3'region -
Neisseria gonorrhoeae
Length = 91
Score = 36.3 bits (80), Expect = 0.83
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTA 675
W VY++ +N Y GI+ N +R+ H+ +GAK R +R+V A D TA
Sbjct: 6 WSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRVFKPVAMRIV---AGGMDKGTA 62
Query: 676 ARMEYNLKR 702
+ E +K+
Sbjct: 63 LKQEIAVKK 71
>UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protein;
n=3; Sphingomonadales|Rep: Excinuclease ABC, C
subunit-like protein - Novosphingobium aromaticivorans
(strain DSM 12444)
Length = 99
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 642
VYI+ G +Y G+TS+L RR+ QH N G+ + +RLV+
Sbjct: 10 VYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVW 55
>UniRef50_A3XQ90 Cluster: Endo/excinuclease amino terminal domain
protein; n=1; Leeuwenhoekiella blandensis MED217|Rep:
Endo/excinuclease amino terminal domain protein -
Leeuwenhoekiella blandensis MED217
Length = 94
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 508 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
VYIL Y G+TSNL +RI H K+G+ L+Y + D A
Sbjct: 6 VYILTNTYRTTFYIGVTSNLQQRIVDHKEKKGSAFTSKYNVCDLIYFEEFS-DIIQAISR 64
Query: 685 EYNLKRKCSKYFKLRLIK 738
E LK K +KL LIK
Sbjct: 65 EKQLK-NWKKDWKLNLIK 81
>UniRef50_Q8DE33 Cluster: Predicted endonuclease; n=7;
Proteobacteria|Rep: Predicted endonuclease - Vibrio
vulnificus
Length = 94
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 684
+YIL Q G LY G+T +L +RI QH N + + + LVY ++ + A +
Sbjct: 1 MYILASQPYGTLYIGVTGDLIKRIWQHKNGESDGFTKKYRVVHLVYF--EQFEAMSDAIL 58
Query: 685 EYNLKRKCSKYFKLRLIKA 741
+K ++ +K++LI++
Sbjct: 59 REKQLKKWNRQWKIQLIES 77
>UniRef50_Q0LXL6 Cluster: Excinuclease ABC, C subunit-like; n=3;
Alphaproteobacteria|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 157
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 484 LYTNKVWCVYILRQDN-GKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAY 660
L + VYI+ G LY G+TS+L R QH N + R LV+
Sbjct: 27 LMREHAYAVYIMSDSRRGVLYAGVTSDLQTRAHQHRNGEFGGFTREHGCKSLVWFETHD- 85
Query: 661 DYKTAARMEYNLKRKCSKYFKLRLIKA 741
D + A R E +KR + +K+ L++A
Sbjct: 86 DIEAAIRREKLIKR-WRRAWKIALVEA 111
>UniRef50_A2U060 Cluster: Putative uncharacterized protein; n=1;
Polaribacter dokdonensis MED152|Rep: Putative
uncharacterized protein - Polaribacter dokdonensis
MED152
Length = 80
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +1
Query: 538 LYTGITSNLNRRIKQHSNK-QGAKCLRNATNLR-LVYHSASAYDYKTAARMEYNLKRKCS 711
+Y G+T++L RRI++HS + ++ N N + L+YH +TA + E LK K S
Sbjct: 1 MYIGVTNHLKRRIEEHSVPIESSRQFTNKYNCKYLIYHE-HYNSIETAIKREKQLK-KWS 58
Query: 712 KYFKLRLIKA 741
+ K LIK+
Sbjct: 59 RVKKETLIKS 68
>UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L300 - Mimivirus
Length = 166
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 505 CVYILRQDNGKLYTGITSNLNRRIKQHSN----KQGAKCLRNATNLRLVYHSASAYDYKT 672
C I+ D+ + Y G T+N RR+ H+N ++GAK R T + ++Y S ++ K
Sbjct: 6 CYLIMSLDSKETYIGSTNNRQRRLNDHNNLNPSRKGAKRTRGRTWIPILY--ISGFENKN 63
Query: 673 AA-RMEYNLKRKCSKYFKLRLI 735
A E KR K RL+
Sbjct: 64 ACLSFESGWKRLSKKRNIQRLL 85
>UniRef50_Q1GQY7 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Sphingopyxis alaskensis|Rep: Excinuclease ABC, C
subunit-like protein - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 119
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 529 NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEYNLKRKC 708
NG LY G+TS+L R+ QH N+ + LV++ A D + A + E +K K
Sbjct: 37 NGTLYLGVTSDLLARVWQHRNEVVESFTKKYGCHTLVWYEAFD-DIQQARQRELQMK-KW 94
Query: 709 SKYFKLRLIK 738
+ +K+ LI+
Sbjct: 95 KRAWKIELIE 104
>UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain
protein; n=6; Lactobacillales|Rep: Excinuclease ABC, C
subunit domain protein - Lactobacillus reuteri F275
Length = 96
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTAAR 681
+Y+L + Y G T+N+ RR H QGAK R L+L+Y S A
Sbjct: 8 IYVLYCADNSFYCGFTNNVKRRFHTHQTYQGAKYTRVKKRHPLKLIY-SEEFESKHDALS 66
Query: 682 MEYNLKRK 705
EY K +
Sbjct: 67 AEYYFKHQ 74
>UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Flavobacterium johnsoniae UW101
Length = 101
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 538 LYTGITSNLNRRIKQHSNKQGAKCLRNATNLR-LVYH 645
+Y G+TSNL +RI +H NK+ K NL LVY+
Sbjct: 17 VYVGVTSNLPKRILEHKNKKYPKSFSAKYNLNILVYY 53
>UniRef50_Q5CRL8 Cluster: Sin3 like paired amphipathic helix
containing protein; n=2; Cryptosporidium|Rep: Sin3 like
paired amphipathic helix containing protein -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 AVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARIMSLKENVAFLAPLSAS 181
A+ES +N +D NA I L + + + ++ + F+A L+AS
Sbjct: 1253 AMESSETIKLNQFSDKENAKISKLLLNNPVSFFVCMEQTFVKPLLYYSPKMKFIAKLAAS 1312
Query: 182 ANIFNYMAELATR-AGKQPSMFQNATFLTSAANAVNSP 292
A ++ + + R + PS+ + +T S N N P
Sbjct: 1313 AQWLGFLPDNSHRDIARSPSILRESTSTNSIRNNANEP 1350
>UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacterium
nucleatum|Rep: UPF0213 protein FN1575 - Fusobacterium
nucleatum subsp. nucleatum
Length = 100
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 606
+Y+LR ++G +YTG+ + +R ++H + +GAK
Sbjct: 5 LYMLRCEDGSIYTGVAKDYLKRYEEHLSAKGAK 37
>UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 93
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC 609
VYIL+ + YTG T NL +R+ QH +K C
Sbjct: 4 VYILQCSDKSYYTGQTDNLEKRLTQHQDKMIPGC 37
>UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI
domain; n=2; Flavobacteriales|Rep: Predicted
endonuclease containing a URI domain - Flavobacteria
bacterium BAL38
Length = 101
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +1
Query: 496 KVWCVYILRQDNGKLYTGITSNLNRRIKQHS 588
K++ VYIL+ + YTGIT+++ RR+ +H+
Sbjct: 2 KLFYVYILKCKDDSFYTGITNSIERRLYEHN 32
>UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Geobacter lovleyi SZ
Length = 151
Score = 33.9 bits (74), Expect = 4.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 508 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 642
+YIL +G YTG T NL +R+ +H GA+ ++L+Y
Sbjct: 4 MYILECADGSYYTGSTWNLEKRLWEHQQGIGARHTAKRLPVKLLY 48
>UniRef50_Q14PT1 Cluster: Putative uncharacterized protein yazA;
n=1; Spiroplasma citri|Rep: Putative uncharacterized
protein yazA - Spiroplasma citri
Length = 99
Score = 33.5 bits (73), Expect = 5.8
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 511 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAK--CLRNATNLRLVYHSASAYDYKTAARM 684
Y+L + LY G T NLNRR ++H+ GAK L ++++Y + Y ++AA
Sbjct: 7 YVLFCADETLYAGYTVNLNRREQEHNMGAGAKYTSLAKRRPVKIIY--SEEYATRSAAMQ 64
Query: 685 EYNLKRKCSKYFKLRLIK 738
++ S+ K+ ++
Sbjct: 65 REAAFKQLSRLEKIMFLQ 82
>UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB76036.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 170
Score = 33.5 bits (73), Expect = 5.8
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +1
Query: 493 NKVWCVYILRQDNG--KLYTGITSNLNRRIKQHSN--KQGAK 606
+K W VY++ K Y GIT++ +RR+KQH+ + GAK
Sbjct: 51 SKSWSVYLILSTTEPIKTYVGITTDFSRRLKQHNGEIRGGAK 92
>UniRef50_A7IVR4 Cluster: Putative uncharacterized protein B039L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
B039L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 418
Score = 33.1 bits (72), Expect = 7.7
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 511 YILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNL--RLVYHSASAYDYKTAAR 681
+++ D K +Y GIT ++ RR KQH + + +++ L RL H AY+ KT +
Sbjct: 26 FVVNPDMFKYMYIGITDDVKRRWKQHLDCSNDETYKSSQKLYRRLRKHGWDAYN-KTIVK 84
Query: 682 MEYNLKRKCSKYFKLRLIKAXTTF 753
L R+ +K +++ +I TF
Sbjct: 85 S--GLTREEAKMWEIEMIARYRTF 106
>UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 33.1 bits (72), Expect = 7.7
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 502 WCVYILRQDNGK-LYTGITSNLNRRIKQH--SNKQGAK 606
+C Y+LR N K Y G T N RR+ QH S+K GAK
Sbjct: 16 YCCYLLRSKNRKSYYIGSTPNPARRLGQHNGSSKGGAK 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,970,015
Number of Sequences: 1657284
Number of extensions: 11516168
Number of successful extensions: 37145
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 35790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37095
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -