Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f10
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 25 0.58
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 22 5.4
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 5.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 5.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.5
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 9.5
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 224 FFSSCCLIAGSYLPVHST*GITSSK 150
FFS CC++ YL T +T+SK
Sbjct: 12 FFSFCCILFFIYLYWQQTSNLTTSK 36
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 522 NDRFVGSRGSIPRGQAQT 575
N R SRG IPR + +T
Sbjct: 232 NSRRASSRGLIPRAKVKT 249
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = -1
Query: 326 SCFLKSSSVFCATTACSAFVCSVNVAISLVTNCLFFSSCCLI 201
+CF ++ + C T C C N+ + V CC I
Sbjct: 695 TCFCENGNNKCFTMECPQVTCPDNMKLEKVP-----GECCAI 731
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 298 KTEEL--FKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKK 471
KTE+L +K++ E I + +A + + + R+Y + K+EMM
Sbjct: 523 KTEDLDEIQKEKGDEYYETISN-HTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFL 581
Query: 472 DELLQVKDTQVSNLIAK 522
+L++ + Q + +A+
Sbjct: 582 KSILRLDEDQSARRVAQ 598
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 298 KTEEL--FKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKK 471
KTE+L +K++ E I + +A + + + R+Y + K+EMM
Sbjct: 523 KTEDLDEIQKEKGDEYYETISN-HTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFL 581
Query: 472 DELLQVKDTQVSNLIAK 522
+L++ + Q + +A+
Sbjct: 582 KSILRLDEDQSARRVAQ 598
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 298 KTEEL--FKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKK 471
KTE+L +K++ E I + +A + + + R+Y + K+EMM
Sbjct: 523 KTEDLDEIQKEKGDEYYETISN-HTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFL 581
Query: 472 DELLQVKDTQVSNLIAK 522
+L++ + Q + +A+
Sbjct: 582 KSILRLDEDQSARRVAQ 598
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 298 KTEEL--FKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKK 471
KTE+L +K++ E I + +A + + + R+Y + K+EMM
Sbjct: 523 KTEDLDEIQKEKGDEYYETISN-HTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFL 581
Query: 472 DELLQVKDTQVSNLIAK 522
+L++ + Q + +A+
Sbjct: 582 KSILRLDEDQSARRVAQ 598
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 477 LVFFVHHFIFSLHSFLKPGVHAVEV 403
+ F H +IF + +F+ V A+EV
Sbjct: 153 ITFGWHTYIFDVPNFVNEYVQAIEV 177
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 164 FLKCYARASTTPQL 205
FLKC A + TP++
Sbjct: 432 FLKCIASGNPTPEI 445
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 629 WPVIAVNVVPSRVTHSTGCLRLS 561
WP VN VP + +RLS
Sbjct: 282 WPARPVNQVPRDLNREVDQIRLS 304
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,410
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -