Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f10
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 33 0.16
02_04_0524 + 23671376-23671603,23672159-23672392 33 0.21
03_06_0205 - 32347636-32347646,32347762-32347801,32347959-323480... 32 0.37
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 31 1.1
01_06_0195 + 27379266-27379300,27379870-27382174 30 1.5
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 30 2.0
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 29 2.6
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 29 2.6
04_03_0446 - 16012926-16013042,16013266-16013469 29 3.5
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 29 4.6
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 28 6.1
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 28 6.1
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 28 6.1
02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064... 28 6.1
12_01_0393 - 3100230-3100714,3100973-3101097,3101271-3101399,310... 28 8.0
07_03_0439 + 18212584-18213065,18214164-18215010 28 8.0
04_01_0301 + 4016588-4016627,4016715-4018837 28 8.0
01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144... 28 8.0
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/107 (21%), Positives = 45/107 (42%)
Frame = +1
Query: 148 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQE 327
LL++ I ++ A+ E + K + K + E L K E+ KK E
Sbjct: 1654 LLQDTIERIGENSTIKDALLLSERQEKDAIKKELVEAGERNEEL----IMKIEDTDKKIE 1709
Query: 328 FIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 468
++ I + IEAKD+ + + + + E ++ +E++ K
Sbjct: 1710 HLQNAIIKLEGDIEAKDISLEAAREENDTIRKSLAEAQEKNEELLRK 1756
>02_04_0524 + 23671376-23671603,23672159-23672392
Length = 153
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 657 VLLAFHVRLLAGNSRKRSAVARHAQHRMFALVRGVLNRAIRQIYHFGN*IGD 502
+L+AF LL G + R A + A + + +G + I IY+FG+ I D
Sbjct: 9 ILVAFLALLLVGTCQARPAPGKAASSSLSSAAKGAVVDGITDIYNFGDSISD 60
>03_06_0205 -
32347636-32347646,32347762-32347801,32347959-32348060,
32348473-32348599,32348893-32350835,32351347-32351367
Length = 747
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 397 MTDLNRMYT-GFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDRAVQYPADKRK 573
M+ L RM+ QE + + +K L D + L K+ + R Q + K
Sbjct: 331 MSKLKRMHELDLQEKTEELFKFKREKGLLTLKNDVEFEPLRKKIPQIISRMDQIISKNIK 390
Query: 574 HPVLCVTRDGTTFTAITGQK---TYVESQKHKRNIDAANI 684
P LC+T DG I+ ++ Y E+Q H R + A N+
Sbjct: 391 MPSLCMTNDGLDERCISAKRIDSLYYENQ-HLRGLLADNM 429
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 511 LIAKMIDLSDRAVQYPADKRKHPVL 585
LIA+++ LSDRA AD+R HPVL
Sbjct: 33 LIAELLLLSDRAPSQFADRRFHPVL 57
>01_06_0195 + 27379266-27379300,27379870-27382174
Length = 779
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 571 CACPRGIEPRDPTNLSFWQLNWRP 500
C+CP G E RDPTN W RP
Sbjct: 293 CSCPPGYEMRDPTN---WSRGCRP 313
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +1
Query: 334 ERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNL 513
E I+++ + IE K + ++L ++YTG ++ +K+E + D++ +KD + N
Sbjct: 498 ENSISLQVETIEDKTNFMPEKFSELEKVYTGCEKLNNKKEE-QEENDKINTLKDEKDHNT 556
Query: 514 IAKMIDLSDRAVQYPADKRKHPV 582
+ D VQ P DK K+ V
Sbjct: 557 F-EHTDSIKGEVQLP-DKDKNLV 577
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 289 VAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 468
V ++ E KK E + I +D++I +DL+ R + + GF M+ KDE + +
Sbjct: 658 VFKRLNEQKKKNEKPDLISLFEDQKIMKQDLEEIRKRLYMLELKEGFH--MEEKDEPIQE 715
Query: 469 KDELLQ 486
D++++
Sbjct: 716 DDQVVE 721
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 304 EELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD-EL 480
E L KK+ ++ A D EAKD T D N + + + E HK D E
Sbjct: 118 ERLQKKENAVQAKDA--DATNEAKDADATNEAKDANATNEAYATSTAKHKETSHKTDTEP 175
Query: 481 LQVKDTQVSNLIAKMIDLSDRAVQYPADKRK 573
LQ+ + + ++K + +S+ A ++K++
Sbjct: 176 LQLLKKETT--LSKEVSISNTAKVKSSEKQR 204
>04_03_0446 - 16012926-16013042,16013266-16013469
Length = 106
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 546 GSIPRGQAQTSGAVRDARRHYVYGYYRPKDVRGKPKAQT 662
G +PRG + G + + RR G +R + G P ++
Sbjct: 22 GGVPRGAEVSGGGLEEERRRQAKGSWRWRQAEGSPAGRS 60
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 196 PAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAK 375
P +K+ + + L + EH L A+K+ + K++E +ER I K+K+ E K
Sbjct: 579 PPVKKPSKLGENLTSLAAVVENEHKRLL----ARKSI-IEKRKEDLERQILEKEKEEEKK 633
Query: 376 DLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMI-DLSDRAVQ 552
L V + + R+ + R+ E + + +L++ + + L+ K I +++ R +
Sbjct: 634 RLSVLKKSAEDERIRL-LNDVKLREQERIRR--QLVEKEKIEAEELLQKQIKEIAKRGGK 690
Query: 553 YP 558
P
Sbjct: 691 KP 692
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 193 DPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEA 372
D + ++ K+ V +L E ++ VA+KT+EL + ++ I +Q+EA
Sbjct: 145 DDQVNHLDDALKECVRQLRQAREEQEEKIRDAVAKKTQELDSHKSELQNHIYELKQQLEA 204
Query: 373 KDLQVTRV 396
L+ V
Sbjct: 205 AKLEAATV 212
>07_03_1424 -
26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/44 (25%), Positives = 28/44 (63%)
Frame = +1
Query: 382 QVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNL 513
+++ V + +MY + ++ R++E++H ++LLQ + T + +L
Sbjct: 797 EISLVKENAEKMYGHDEISVYRQNEILHSSEQLLQDELTHIKSL 840
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +1
Query: 193 DPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIA-IKDKQIE 369
D + ++ E NK + I + + LQA + ++ EEL +++ +E+ + ++D+ +
Sbjct: 606 DETLIEKLENNKTDLQSKITKEVKENSILQASLGRRKEELHERRLALEKEVENLRDQLQK 665
Query: 370 AKDLQVT--RVMTDLNRMYTGFQETMQRKDEMMHKKD-ELLQVKDTQVSNLIAKMIDL 534
+ L+ + + +L R F T+ K K D E + + + NL K+ DL
Sbjct: 666 ERKLRASLESGLMNLRRGQVSFPSTIDSKT----KADLEEVATAEADILNLKQKVSDL 719
>02_02_0536 +
11304298-11304400,11304731-11305797,11306026-11306416,
11307164-11308041
Length = 812
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +1
Query: 289 VAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 468
V ++ +E KK E + + +D++I +DL+ R + + GF M+ KDE + +
Sbjct: 608 VFKRLDEQKKKNEKPDLMSLFEDQKIMKQDLEEIRKRLYMLELKEGFH--MEEKDEPIQE 665
Query: 469 KDELL 483
D+++
Sbjct: 666 DDQVV 670
>12_01_0393 -
3100230-3100714,3100973-3101097,3101271-3101399,
3102480-3102508
Length = 255
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 600 RHYVYGYYRP-KDVRGKPKAQT*HRRC 677
+HY++G +RP KD+ G + Q H C
Sbjct: 99 KHYLWGLFRPRKDIVGVAEEQAAHAMC 125
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 466 KKDELLQVKDT---QVSNLIAKMIDLSDRAVQYPADKRKHPVLCVTRDG 603
K D+L++ D+ + S L KM++L R + P R+HP + R G
Sbjct: 393 KIDDLIKQYDSHSRRASELRLKMVNLQTRPISPPPRLRRHPSHLLPRKG 441
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 331 IERIIAIKDKQIEAK--DLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELL 483
+E ++ + K+ AK + Q +M +L + F+E KD + K DELL
Sbjct: 163 MELVVLTEAKKAAAKACEAQNDEIMKELEDLKRKFEELQTNKDLVQAKNDELL 215
>01_01_0171 +
1446221-1446902,1447040-1447221,1447339-1447409,
1447480-1447486,1447530-1447619,1447694-1447981,
1448121-1448333,1448860-1449087
Length = 586
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/126 (16%), Positives = 54/126 (42%)
Frame = +1
Query: 214 EEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTR 393
E + + KL+A + V + + + +ER++ +++Q++A + ++ R
Sbjct: 172 ENEGTRKTDKLVANLASQVEVKKRHVEELESQYNETTASLERVMEQREQQLQAYNEEI-R 230
Query: 394 VMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDRAVQYPADKRK 573
M DL ++ Q M ++ + +Q+ D++ L + + + +K K
Sbjct: 231 KMQDLALRHS--QRIMDENKKLRSDLESKMQLLDSRSKELDKLAVQSNSDRMNLEKEKEK 288
Query: 574 HPVLCV 591
+ L +
Sbjct: 289 NVNLAI 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,192,693
Number of Sequences: 37544
Number of extensions: 369826
Number of successful extensions: 1157
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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