BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f10
(689 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 31 0.045
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 31 0.045
AY578804-1|AAT07309.1| 133|Anopheles gambiae maverick protein. 24 5.2
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 5.2
Z22925-1|CAA80505.1| 211|Anopheles gambiae ANG12 precursor prot... 23 9.1
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.045
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 AQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQR-KDEMMHK 468
A+ EE +++E +ER+ A+ QIE ++ Q+ + L + YTG + ++ K E +
Sbjct: 670 AKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEYGNS 729
Query: 469 KDELLQVKDTQVSNLI 516
K + + T + ++I
Sbjct: 730 KIYPIFPRYTMLKDMI 745
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.045
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 AQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQR-KDEMMHK 468
A+ EE +++E +ER+ A+ QIE ++ Q+ + L + YTG + ++ K E +
Sbjct: 670 AKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEYGNS 729
Query: 469 KDELLQVKDTQVSNLI 516
K + + T + ++I
Sbjct: 730 KIYPIFPRYTMLKDMI 745
>AY578804-1|AAT07309.1| 133|Anopheles gambiae maverick protein.
Length = 133
Score = 23.8 bits (49), Expect = 5.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 401 PTSTACTPGFRKLCR 445
P +TACT G ++ CR
Sbjct: 21 PKTTACTAGNKRCCR 35
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 188 LPVHST*GITSSKSHSCNSMAYGSL 114
+PV S ++++ S SC+S A GSL
Sbjct: 233 IPVSSCSPLSTASSASCSSSAAGSL 257
>Z22925-1|CAA80505.1| 211|Anopheles gambiae ANG12 precursor
protein.
Length = 211
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 421 TGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDL 534
T F+ ++ HK+ L T+V N+I K+ L
Sbjct: 156 TEFKALFEKMQNFDHKQLRALYESSTEVQNMIHKLESL 193
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,001
Number of Sequences: 2352
Number of extensions: 13700
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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