Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13f10
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 35 0.063
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 35 0.063
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.063
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.063
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 33 0.15
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 33 0.19
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 33 0.25
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 33 0.25
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 31 0.59
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 31 0.59
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 1.0
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 31 1.0
Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z50176-1|CAA90538.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.4
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 2.4
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 3.1
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 3.1
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 29 3.1
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 3.1
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 29 3.1
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 29 3.1
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical p... 28 5.5
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 28 5.5
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 5.5
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 7.2
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 28 7.2
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 7.2
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical pr... 27 9.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine rece... 27 9.6
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.063
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 148 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 315
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 316 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRKDEMMHKKDELLQVK 492
++E R K+K+ +L++ + + +LN+ + + ++RK+ +H L+ +
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLGMKLEDE 1113
Query: 493 DTQVSNL 513
V+ L
Sbjct: 1114 QAAVAKL 1120
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.063
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 148 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 315
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 316 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRKDEMMHKKDELLQVK 492
++E R K+K+ +L++ + + +LN+ + + ++RK+ +H L+ +
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLGMKLEDE 1113
Query: 493 DTQVSNL 513
V+ L
Sbjct: 1114 QAAVAKL 1120
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.063
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 148 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 315
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 316 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRKDEMMHKKDELLQVK 492
++E R K+K+ +L++ + + +LN+ + + ++RK+ +H L+ +
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLGMKLEDE 1113
Query: 493 DTQVSNL 513
V+ L
Sbjct: 1114 QAAVAKL 1120
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 34.7 bits (76), Expect = 0.063
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +1
Query: 205 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQ 384
+Q EE+ + L T I T + Q + + K +E+IE+ + D
Sbjct: 478 RQYEEETRSLQTN-IRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDAD 536
Query: 385 VTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDRAVQYPAD 564
+TR+ + +M ++ Q KD+ + + E ++V +++ SDR +Q +
Sbjct: 537 ITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASI----TSDRQIQSLKE 592
Query: 565 K 567
K
Sbjct: 593 K 593
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.063
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +1
Query: 205 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQ 384
+Q EE+ + L T I T + Q + + K +E+IE+ + D
Sbjct: 478 RQYEEETRSLQTN-IRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDAD 536
Query: 385 VTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDRAVQYPAD 564
+TR+ + +M ++ Q KD+ + + E ++V +++ SDR +Q +
Sbjct: 537 ITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASI----TSDRQIQSLKE 592
Query: 565 K 567
K
Sbjct: 593 K 593
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Frame = +1
Query: 262 EHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETM 441
+H A + ++ Q + +FK +I + +I +D + V + MYTG E++
Sbjct: 228 KHIKAHRCILGQNSP-VFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTGATESL 286
Query: 442 QRK---DEMMHKKD--ELLQVKDTQVSNLIAKMIDLSD 540
+ + DE++ D E+L +KD Q LIA+ I+L +
Sbjct: 287 ESQGNIDEILAIADKYEVLMLKD-QCERLIAQTINLKN 323
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 33.1 bits (72), Expect = 0.19
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +1
Query: 202 IKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDL 381
++ + ++ ++L K +E L+A +AQ EEL ++Q E I DKQ +A+ +
Sbjct: 1703 LELENDELEELRAKGGGISSEEKRRLEAKIAQLEEELEEEQSNCELAI---DKQRKAQ-V 1758
Query: 382 QVTRVMTDLNRMYTGFQETMQRKDEMMHK----KDELLQVKDTQVSNLIAKMIDLSDRAV 549
Q+ ++ TDL+ T Q+T K + K ++ +++ S A+M L + V
Sbjct: 1759 QLEQITTDLSMERTLNQKTEAEKQSLERSNRDYKAKITELESGAQSRARAQMAAL-EAKV 1817
Query: 550 QYPADK 567
QY D+
Sbjct: 1818 QYLEDQ 1823
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 LEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEF 330
++E +PQ + D ++ EK ++++ K N + + K E+ KK +
Sbjct: 83 IQEKLPQR--QKQIDEILRALNEKRREVLQKQNEIAGFRVNRTENSMKSKMEKAKKKLDE 140
Query: 331 IERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDEL-LQVKDTQVS 507
+++ ++DK+I + R +++ + +QR+ E KK+E+ ++K +V
Sbjct: 141 MKKKKIVQDKKISRLRSDIARSEKSFDKVEKDIHKEIQRQMENETKKEEIERRIKIFEVE 200
Query: 508 N 510
N
Sbjct: 201 N 201
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 304 EELFKKQEFIERIIAIK-DKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDE- 477
E L K+ IE DK+ + T T +N M + +ET++ + E K+DE
Sbjct: 71 ENLDNKENIIESTFKTAIDKEDTKSCSECTEFKTYMNNMKSVLEETLEEEKEKNKKRDEA 130
Query: 478 ---LLQVKDTQVSNLIAKMIDLSDRAVQYPADKRK 573
L K+ ++ +L ++I LS+ + K K
Sbjct: 131 SKKTLNSKNEEIEHLKKRVISLSNSQSENETMKSK 165
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 31.5 bits (68), Expect = 0.59
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +1
Query: 205 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELF-----KKQEFIERIIAIKD--KQ 363
K+ EE KQ KL+ E ++ + ++ EE+F K E ++++ + D ++
Sbjct: 877 KELEEVEKQGREKLLEKEREFRKTMEEM--EQNEEIFNVLERKYNEQHKKVMKMNDVLRE 934
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSD 540
E K Q+ TDL +ET R+D ++ + K + + L ++ LSD
Sbjct: 935 YERKIEQLNMEKTDLENENQKLRETQNRQDSHYSNLEKEVMEKSSLIDELQNQIQKLSD 993
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 31.5 bits (68), Expect = 0.59
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 5/138 (3%)
Frame = +1
Query: 217 EKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRV 396
E N+ + K+ F EH + + + L + F + K K++ + R
Sbjct: 1042 ETNESELAKVAKGFVEHRLPVVVWMNENGALLVRASAFTSIDMVKKLKKV----VNYRRN 1097
Query: 397 MTDLNRMYTGFQETMQRKDEMMHKKDELL----QVKDTQVS-NLIAKMIDLSDRAVQYPA 561
+ L TG Q+T+ K + + ++K +V N IAK+ + S RAV Y
Sbjct: 1098 ASKLTGSMTGSQQTLHSKASSNEESSSNIVAGAEIKSAEVQMNYIAKLSNSSQRAVSYAL 1157
Query: 562 DKRKHPVLCVTRDGTTFT 615
+ DG T T
Sbjct: 1158 PTQYADKFSTFNDGCTLT 1175
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 205 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKD 357
+ QEE ++ ++K+ + N +AV +K ELFK+ ++R+ +KD
Sbjct: 363 EHQEEPDEDTMSKVKVLYIR--NIKEAVTEEKLNELFKEYASLDRVKKVKD 411
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 386 TCKSLASICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVTNCL 225
TC+ L SIC+ + M S+ L S ++ A S S + I +V CL
Sbjct: 139 TCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHISFCILILIVATCL 192
>Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical
protein C16C10.9 protein.
Length = 274
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +1
Query: 211 QEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVT 390
Q+EK++Q+ ++ E N V+A + + +AI+ + +E + +
Sbjct: 16 QKEKDRQITREVNNLIIEQENTQNRVIAPSPQLM----------VAIR-QSVEQRQEYIR 64
Query: 391 RVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQ 501
R+ D+ RM + E + +MM K+E++Q D Q
Sbjct: 65 RMSIDIQRMLIPYGEDVYLISDMMLLKEEVVQHIDFQ 101
>Z50176-1|CAA90538.2| 408|Caenorhabditis elegans Hypothetical
protein C09G1.1 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 477 LVFFVHHFIFSLHSFLK 427
L FFVHH +F+L S+LK
Sbjct: 20 LFFFVHHLLFNLFSYLK 36
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +1
Query: 334 ERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNL 513
E +A++ K+++ D RV +L++ +TM++ E+ + + L+V + NL
Sbjct: 328 ESCLAVRRKKVQVGDHTSDRVDMELHKEKELMTDTMKQMKEIGERVERQLEVNQSARKNL 387
Query: 514 IAKMIDLSDRAVQYPADKRKHPVLCVTRDGT 606
L D ++ A H + + DGT
Sbjct: 388 ------LRDLTLKQEAISLDHKSVAIGADGT 412
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +1
Query: 241 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNR 414
K +A++ L + + + K++ F+ERI+ + E D + R +T + R
Sbjct: 41 KKVASYETDLKKLSTEMQRLRRDAEKRETFLERIVTAQYHPTELNDTNLARTLTSIKR 98
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 190 YDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKT--EELFKKQEFIERIIAIKDKQ 363
+D + + K + ++ AT + N V ++ + L ++ E + R I ++
Sbjct: 1456 FDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENKIFSQE 1515
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDL 534
I + Q+T+ ++ + Q KDE+ H DE + + S ++ I++
Sbjct: 1516 IRDINEQITQGGRTYQEVHKSVRRLEQEKDELQHALDEAEAALEAEESKVLRLQIEV 1572
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 190 YDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKT--EELFKKQEFIERIIAIKDKQ 363
+D + + K + ++ AT + N V ++ + L ++ E + R I ++
Sbjct: 1456 FDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENKIFSQE 1515
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDL 534
I + Q+T+ ++ + Q KDE+ H DE + + S ++ I++
Sbjct: 1516 IRDINEQITQGGRTYQEVHKSVRRLEQEKDELQHALDEAEAALEAEESKVLRLQIEV 1572
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 29.1 bits (62), Expect = 3.1
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +1
Query: 184 GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQ 363
G Y +K+ EE+N++LV L + + + +E L ++ I+ K +
Sbjct: 62 GNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDIDDAARRKAE- 120
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQ-VKDTQ--VSNLIAKMIDL 534
D++V R DL + +++ QR++ K + + D Q V L A+ L
Sbjct: 121 ---VDVKVARHRDDLAEYRSRYEDIQQRRESDREKISQWTNAIADAQSEVEMLRARFKQL 177
Query: 535 SDRAVQYPADKRK 573
+D + AD +
Sbjct: 178 TDEEKRVTADNSR 190
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 190 YDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKT--EELFKKQEFIERIIAIKDKQ 363
+D + + K + ++ AT + N V ++ + L ++ E + R I ++
Sbjct: 1456 FDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENKIFSQE 1515
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDL 534
I + Q+T+ ++ + Q KDE+ H DE + + S ++ I++
Sbjct: 1516 IRDINEQITQGGRTYQEVHKSVRRLEQEKDELQHALDEAEAALEAEESKVLRLQIEV 1572
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 29.1 bits (62), Expect = 3.1
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +1
Query: 184 GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQ 363
G Y +K+ EE+N++LV L + + + +E L ++ I+ K +
Sbjct: 62 GNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDIDDAARRKAE- 120
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQ-VKDTQ--VSNLIAKMIDL 534
D++V R DL + +++ QR++ K + + D Q V L A+ L
Sbjct: 121 ---VDVKVARHRDDLAEYRSRYEDIQQRRESDREKISQWTNAIADAQSEVEMLRARFKQL 177
Query: 535 SDRAVQYPADKRK 573
+D + AD +
Sbjct: 178 TDEEKRVTADNSR 190
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.1
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +1
Query: 184 GKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQ 363
G Y +K+ EE+N++LV L + + + +E L ++ I+ K +
Sbjct: 93 GNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDIDDAARRKAE- 151
Query: 364 IEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQ-VKDTQ--VSNLIAKMIDL 534
D++V R DL + +++ QR++ K + + D Q V L A+ L
Sbjct: 152 ---VDVKVARHRDDLAEYRSRYEDIQQRRESDREKISQWTNAIADAQSEVEMLRARFKQL 208
Query: 535 SDRAVQYPADKRK 573
+D + AD +
Sbjct: 209 TDEEKRVTADNSR 221
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 314 KSSSVFCATTACSAFVCSVNVAISLVTNCLFFSSCCLIAGSYLPVHST 171
K +S C T S F C+ + L FS+CC I G + HST
Sbjct: 19 KDASFECVTLLKSVF-CARKKKKRFFLSFLSFSTCCSILGWFFLSHST 65
>Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical
protein C36B1.6 protein.
Length = 175
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = -1
Query: 389 VTCKSLASICLSLIAMMR---SINSCFLKSSSVFCATTAC------SAFV-CSVNVAISL 240
+ C S+ S+ L++ M+ +I C L S+ F C ++F+ C+ +
Sbjct: 77 IDCCSIFSVLLNIARMVMFGGTILGCVLVIST-FSRNNECDQLLYWTSFIFCAFFIIFYS 135
Query: 239 VTNCLFFSSCCLI-AGSYLPV 180
+T C+F CC I G+Y V
Sbjct: 136 ITTCIFICCCCCIFTGAYRSV 156
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 292 AQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQ-RK-DEMMH 465
A+ TEEL+ K IER +D + E + + T +M+ +++ Q RK + ++
Sbjct: 399 AKATEELYLKDAKIERFYIDQDTEEEMLHIDGVSMPT---KMFVELEKSGQYRKLNYILK 455
Query: 466 KKDELLQVKDTQVSNL---IAKMIDLSDRAVQYPADKRKHPV 582
E+++V N+ K+++++ V P KHP+
Sbjct: 456 MGREIMKVAGEMRGNIAPEARKVVEIATSMVSSPERPAKHPL 497
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/126 (18%), Positives = 57/126 (45%)
Frame = +1
Query: 199 AIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKD 378
A Q++ ++ LVT L E A+++ A+ ++ Q+F +++ ++ + E K
Sbjct: 990 AAVQEKGRSSDLVTSLEGKIQELETAIESSTAENVQKSKTIQDFTDKVSLLESQICELKS 1049
Query: 379 LQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDRAVQYP 558
Q ++ D N + + ++ EL+++ T + I K+ +++ +
Sbjct: 1050 -QNEQMEIDTN---LNMDQLSEMSSQLESANAELIELTRTS-AETIDKLRGEVEKSTKAM 1104
Query: 559 ADKRKH 576
D+ +H
Sbjct: 1105 MDQEEH 1110
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 320 FLKSSSVFCATTACSAFVCSVNVAISLVTNC--LFFSSCCL 204
FL+ S VF T ++ S I L T LFFSSCC+
Sbjct: 188 FLEPSVVFTPGTFWDTYLTSSFKLILLATGLQVLFFSSCCI 228
>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
protein C01G10.1 protein.
Length = 1204
Score = 27.9 bits (59), Expect = 7.2
Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Frame = +1
Query: 223 NKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMT 402
N QL+++ + TNA+ + + + +E I +D+ D+ + T
Sbjct: 15 NLQLISEDFRILSRVTNAISLQAGAIRKNIKVRDLLVELIRMPRDQFNNIIDVDIKVART 74
Query: 403 DLNRMYTGFQE--TMQRKDEMMHKKDELLQVKDT-QVSNLIAKMIDLSDRAVQYPADKRK 573
+LNRM F++ + + D D + +K+ + +L ++ A++YP
Sbjct: 75 ELNRMGEEFEKLSLLLQNDTNSLVGDNMTDLKNNLKFLSLFSQQTSTFLDAIKYPIKNLM 134
Query: 574 HPVLCVTRDGTTFTAITGQKTYVESQKHKRNIDAAN 681
+ + + + + F + Q V++ K D+ N
Sbjct: 135 NNLTTIIANNSMFRSSCSQ---VDTDNFKSFWDSIN 167
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 262 EHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQ 384
E +Q + +K E++ K E ++ ++ +DK+ + +DLQ
Sbjct: 260 EEIQKMQKALKEKDEQISKLTEQLQGLLINRDKETKVEDLQ 300
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +1
Query: 289 VAQKTEELFKKQEFIERIIAIKDKQIEAKDLQV---TR----VMTDLNRMYTGFQETMQR 447
+A EEL K+ + E KD+ ++ V TR + +L+ + GF ET +
Sbjct: 157 LADCNEELEKRVDEYEEAAEEKDEDLKQSTWDVETLTRQNEALRVELDGVRQGFHETREL 216
Query: 448 KDEMMHKKDEL 480
DE+ H + EL
Sbjct: 217 ADEVKHLRSEL 227
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 208 QQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQV 387
++ + N LV +L A + ++ ++ K E + ++ E +E+ I +DK + ++
Sbjct: 168 KEAQNNSDLVLELKAALQQEKSSSHGML-NKIEIMRQRCEDLEKSILDRDKSEDENIMER 226
Query: 388 TRVMTDLNRMY 420
+RV +LN ++
Sbjct: 227 SRVEKELNALH 237
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 27.9 bits (59), Expect = 7.2
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +1
Query: 166 PQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERII 345
P+V+ G D QQ+ ++++ +K AT + ++TE + E E I
Sbjct: 349 PEVVGRGGVDGGGHQQQHQHQRRTSKHSATTDSVESTASTQSGERTESSTQSIEADEDIA 408
Query: 346 AIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELL-QVKDTQVSNLIAK 522
++++A+ ++ +R T+ R+ + ++KDE++ K ++ K +V K
Sbjct: 409 ----RELDAQLIEESRRETE-KRVKE--EAEQRKKDELLAKLSQIFGYAKSIRVMKKCPK 461
Query: 523 MIDLS 537
M+ LS
Sbjct: 462 MLTLS 466
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 430 QETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSDR 543
++ ++R ++ +KD+L+ KD Q+SNL A +L +
Sbjct: 225 EDEIRRLKTLLAEKDQLIFDKDKQISNLKADQYNLDKK 262
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 27.5 bits (58), Expect = 9.6
Identities = 25/102 (24%), Positives = 40/102 (39%)
Frame = +1
Query: 7 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 186
PP N AKQ D T +T + + LI++ +L++ + + I +L +G
Sbjct: 2589 PPVTANFSAKQFDNELKNAITQAVTNNEHVVLILEDH-----QLRKNIFLQAINSLLASG 2643
Query: 187 KYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEEL 312
QQE + A T ALQ +A + L
Sbjct: 2644 NVPGLFTQQELDGLVALVSEAANQASFTGALQQFLAHRIRSL 2685
>Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical
protein C53D6.11 protein.
Length = 261
Score = 27.5 bits (58), Expect = 9.6
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = -1
Query: 617 AVNVVPSRVTHSTGCLRLSAGY*TARSDKSIILA-IKLETCVSLTCNNSSFLCIISSFLC 441
++ VV V CL L Y +D+ I A + + T + L LC + +
Sbjct: 37 SIFVVKFIVDIVVACLLLLLAYFDRNTDERICGATLVISTSIPLL-QVLLLLCEVIDW-S 94
Query: 440 IVS*NPVYMRLRSVITRVTCKSLASICLSLIAMMRSINSCFLKSSSVFCATT-ACSAFVC 264
+ + +PVY S+++R+ + ++C ++I + ++ S +V C T+ SA
Sbjct: 95 LAAFSPVYFHHSSLLSRIMPFIVGAVCYAII--LTALLVIDATSLTVSCITSPEASAVTS 152
Query: 263 SVNVAISLVTNCL 225
+ + ++++ T C+
Sbjct: 153 AYDFSLAITTVCV 165
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = +1
Query: 241 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMY 420
KL EHTN++Q + +EL ++ E + R ++ +++++ + DL Y
Sbjct: 644 KLRDEMDEHTNSIQEEFKTRIDELNRRVENLLR----ENNRLKSEVNPLKDKYRDLENEY 699
Query: 421 TGFQETMQRKDEMMHKKDEL 480
Q ++ K+ + D++
Sbjct: 700 NSTQRRIEEKETQIRYSDDI 719
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = +1
Query: 241 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMY 420
KL EHTN++Q + +EL ++ E + R ++ +++++ + DL Y
Sbjct: 717 KLRDEMDEHTNSIQEEFKTRIDELNRRVENLLR----ENNRLKSEVNPLKDKYRDLENEY 772
Query: 421 TGFQETMQRKDEMMHKKDEL 480
Q ++ K+ + D++
Sbjct: 773 NSTQRRIEEKETQIRYSDDI 792
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = +1
Query: 241 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMY 420
KL EHTN++Q + +EL ++ E + R ++ +++++ + DL Y
Sbjct: 717 KLRDEMDEHTNSIQEEFKTRIDELNRRVENLLR----ENNRLKSEVNPLKDKYRDLENEY 772
Query: 421 TGFQETMQRKDEMMHKKDEL 480
Q ++ K+ + D++
Sbjct: 773 NSTQRRIEEKETQIRYSDDI 792
>U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine
receptor, class r protein9 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 320 FLKSSSVFCA--TTACSAFVCSVNVAISLVT 234
FLK S + C+ T CS F C V V I ++T
Sbjct: 27 FLKVSLLDCSAKTKCCSIFTCLVGVIIVIIT 57
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical
protein B0244.6 protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 311 SSSVFCATTACSAFVCSVNVAISLVTNCLF-FSSCCLIAGSYL 186
+SS+ C TAC+ + +N +L+ C++ S L+ GS +
Sbjct: 186 TSSMSCTDTACAPLITLINCNNTLLIICIYQIVSVVLVFGSLI 228
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 27.5 bits (58), Expect = 9.6
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +1
Query: 166 PQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERII 345
P+V+ G D QQ+ ++++ +K AT + ++TE + E E I
Sbjct: 349 PEVVGRGGVDGGGHQQQHQHQRRTSKHSATTDSVESTASTQSGERTESSTQSIEADEDIA 408
Query: 346 AIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELL-QVKDTQVSNLIAK 522
++++A+ ++ R T+ R+ + ++KDE++ K ++ K +V K
Sbjct: 409 ----RELDAQLIEEARRETE-KRVKE--EADQRKKDELLAKLSQIFGYAKSIRVMKKYPK 461
Query: 523 MIDLS 537
M+ LS
Sbjct: 462 MLTLS 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,322,236
Number of Sequences: 27780
Number of extensions: 321686
Number of successful extensions: 1211
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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