Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13e24
(578 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 62 1e-11
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 58 2e-10
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 57 4e-10
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 57 4e-10
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 57 4e-10
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 52 1e-08
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 49 1e-07
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 49 1e-07
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 48 2e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 47 4e-07
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 46 7e-07
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 45 2e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 43 8e-06
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 39 1e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 33 0.007
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 26 0.77
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 1.8
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 2.3
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 23 7.2
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 9.5
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 62.1 bits (144), Expect = 1e-11
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSI 394
+I GDFN+ HT WGS +N G ELL ++++ L ILN+GS PT + + S ID++
Sbjct: 119 VIAGDFNAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTF 178
Query: 393 CTPQLASSLSWSTLCSTYNSDH 328
TP L +W L SDH
Sbjct: 179 ATPSLVLHDTWEVL-DFARSDH 199
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 58.4 bits (135), Expect = 2e-10
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = -3
Query: 576 PFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLS 397
P +I GDFN+ T WGS +N+ G +L+ +L ++N G + S IDL+
Sbjct: 114 PIIISGDFNAWATEWGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVRNSRT-SIIDLT 172
Query: 396 ICTPQLASSLSWSTLCSTYNSDH 328
C+P LASS++W + SDH
Sbjct: 173 FCSPALASSMNWRVSNAYTLSDH 195
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 57.2 bits (132), Expect = 4e-10
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = -3
Query: 576 PFMILG-DFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAID 403
P ++LG DFN+ H +WGS+ + G ELL+ ++ L +LN G+ + T G S ID
Sbjct: 114 PNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVID 173
Query: 402 LSICTPQLASSLSWSTLCSTYNSDH 328
++ +P + +W L S + SDH
Sbjct: 174 VTFASPSIVRYNTWEVLKSYWYSDH 198
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 57.2 bits (132), Expect = 4e-10
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSI 394
+I GDFN+ H WGS ++ G ELL + L +LN G+ + G S +D++
Sbjct: 120 VIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAF 179
Query: 393 CTPQLASSLSWSTLCSTYN-SDH 328
TP +A +W+ +C Y+ SDH
Sbjct: 180 ATPTIAQPGTWN-VCGDYSYSDH 201
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 57.2 bits (132), Expect = 4e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSI 394
+I GDFN+ HT WGS+ ++ G +LL ++ L ++NSG+ PT + + S ID+
Sbjct: 139 VIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCF 198
Query: 393 CTPQLASSLSWSTLCSTYNSDHYPIIIS 310
TP +A +W + SDH I S
Sbjct: 199 ATPSIARPETWE-VHEFARSDHQLITYS 225
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 52.4 bits (120), Expect = 1e-08
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSI 394
++ GDFN+ H WGS + G ELL ++ L ILN G PT + + S ID+S
Sbjct: 182 VVAGDFNAWHEEWGSGRNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSF 241
Query: 393 CTPQLASSLSWSTLCSTYNSDH 328
+ ++ +WS + + SDH
Sbjct: 242 ASREIVRPDTWSVIPFS-RSDH 262
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 48.8 bits (111), Expect = 1e-07
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI-SAIDLSI 394
++ GDFN+ H WGS + G EL +++ L ++N G G + S +D++
Sbjct: 130 VVAGDFNARHEEWGSPRTCDRGEELHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAF 189
Query: 393 CTPQLASSLSWSTLCSTYNSDH 328
+P +A +W S SDH
Sbjct: 190 ASPSIARPDTWVVSTSYTASDH 211
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 48.8 bits (111), Expect = 1e-07
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSI 394
++ GDFN+ H WGS SN G LL+ L ++N G+ G S +D++
Sbjct: 176 VVAGDFNAWHEEWGSRRSNERGEVLLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTF 235
Query: 393 CTPQLASSLSWSTLCSTYNSDHYPIIIS 310
+ +A +W + SDH I S
Sbjct: 236 ASSSIAQPSTWLVRNTDTRSDHRYITYS 263
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 48.0 bits (109), Expect = 2e-07
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = -3
Query: 576 PFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLS 397
P +I GDFN+ WGS +NS G +L+ + + N+G+ + + S +D++
Sbjct: 112 PLVIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDIT 170
Query: 396 ICTPQLASSLSWSTLCSTYNSDH 328
C+ L+ L+W + SDH
Sbjct: 171 FCSTTLSERLNWRVSDALTLSDH 193
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 47.2 bits (107), Expect = 4e-07
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDL-- 400
++ GDFN+ HT+WGS + G LL +++ L +LN G+ G S ID+
Sbjct: 117 LLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAF 176
Query: 399 ---SICTPQLA--SSLSWSTLCSTYNSDH 328
SIC P LA S+ W L SDH
Sbjct: 177 ASPSICRPDLAANSATCWRILSRYSYSDH 205
Score = 24.2 bits (50), Expect = 3.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 368 REDANWGVQMDRSMALITS 424
+ + NW V D+S+A++TS
Sbjct: 40 QNNGNWVVDRDKSVAIVTS 58
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 46.4 bits (105), Expect = 7e-07
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = -3
Query: 573 FMILGDFNSHHTSWGSSVSNS------YGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 412
F+I GDFN+ SW + + G +L +LN GS PG S
Sbjct: 114 FVIGGDFNAWSASWNNQLGERGETQKRRGELVLSTFAQIDAILLNDGSTPTYVGPGRT-S 172
Query: 411 AIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 313
+DL+ + +A S W L S NSDH I I
Sbjct: 173 VVDLTFASRTVARSFKWEVLSSYMNSDHRAIRI 205
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 45.2 bits (102), Expect = 2e-06
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -3
Query: 573 FMILGDFNSHHTSWGSSVS------NSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 412
F++ GDFN+ +SW +++ G LL + ++N+G T +T E S
Sbjct: 116 FVVAGDFNAWSSSWANTLGARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKS 173
Query: 411 AIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 310
AIDL+ + L + W L NSDH I+I+
Sbjct: 174 AIDLTFVSQSLMETTGWEVLPDYMNSDHIGILIT 207
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 42.7 bits (96), Expect = 8e-06
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 561 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTP 385
GD N+ HT+WGS +N+ G ++ ++D L +LN+G +PT L S +D++ +
Sbjct: 120 GDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVAFASS 179
Query: 384 QLA 376
+A
Sbjct: 180 SIA 182
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 39.1 bits (87), Expect = 1e-04
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -3
Query: 570 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILN 457
++ GDFN+ H WGSS + G ELL + D L +LN
Sbjct: 118 LLAGDFNAMHLDWGSSRTCPKGLELLQLADNLGLVLLN 155
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.007
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 513 SYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNS 334
S G ++D L +LN G+ + S +D+S C+P L +W +C S
Sbjct: 145 SRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNW-RVCDETPS 203
Query: 333 DHYPI 319
DH I
Sbjct: 204 DHNTI 208
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 26.2 bits (55), Expect = 0.77
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -1
Query: 218 ELADQFLDRLAPPSAP-LNDPILSYKQYNSDAPSSLNLTFTLVELKGVLN---HVKDS-A 54
E+ + F DR A +P +ND + ++N++ ++ + VL+ +K S A
Sbjct: 499 EMCNLFADRFADCFSPAMNDTDTIDAALVNTPAGAINMSTPFIDSEIVLSALAQLKPSFA 558
Query: 53 PGEDGIPYSFL 21
PG DGIP + L
Sbjct: 559 PGPDGIPSTVL 569
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 25.0 bits (52), Expect = 1.8
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 170 LNDPILSYKQYNSDAPSSLN--LTFTLVELKGV 78
+NDPI+ + ++D P++ N L+F +V+ G+
Sbjct: 1186 INDPIVKLRATDADDPTNGNGQLSFDIVDPSGI 1218
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.6 bits (51), Expect = 2.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 360 STLCSTYNSDHYPIIISFP*NTCYCHMAKYQKI*ISCQSF*RIVA 226
STL T+N Y + + +P T YC ++++ I C S ++A
Sbjct: 135 STLNVTFNYT-YMLYLDWPFGTMYCKISQFVAILSICASVFTLMA 178
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 23.0 bits (47), Expect = 7.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 313 FISLKHMLLSYGEISKDLDQLSILLTHCCCL 221
F LK L + +I + + L+ L+TH C L
Sbjct: 227 FAELKECLKYHKQIIQYVHDLNSLVTHLCLL 257
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 22.6 bits (46), Expect = 9.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 95 VELKGVLNHVKDSAPGEDGI 36
VEL NH AP +DG+
Sbjct: 302 VELTNFYNHSCTKAPAQDGV 321
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,927
Number of Sequences: 2352
Number of extensions: 12183
Number of successful extensions: 41
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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