Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13e12
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    26   1.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   3.0  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   4.0  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   4.0  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   4.0  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   4.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.0  

>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 77  TWCLLKTPSFLSTKCLYTFFINKAC 3
           TW + KTP ++S+K L  F   +AC
Sbjct: 195 TWLVYKTPIYVSSKQLEAFRQLQAC 219


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 147 VAAERRLVDQIHICLIHNHCIEQYVVFVKNALVFKHQ 37
           + AERR++ ++  C+   H  +  V+++K   + KHQ
Sbjct: 177 IKAERRVLKELGFCVHVKHPHKLIVMYLKYLELEKHQ 213


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = -2

Query: 207 TAERKNFENGRDKLFAIVNNVAAERRLVDQIHICLIHNHCIEQYVVFVKNALVFK 43
           TA  +  E   + L A + ++ A      QIH+C+     +E   +F+  +   K
Sbjct: 191 TARVRELEARLEALEAQLQSMRAREEFQQQIHVCMARKAWLEYEELFLLYSATLK 245


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 140 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 232
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 140 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 232
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 IFTLSSKIVVA-VPVNWENDNLSVL 261
           I+ L   + VA V +NW  DNL ++
Sbjct: 314 IYALEGSVAVAGVAMNWLRDNLKII 338


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 535 WLNLLSPCAMRKLATRALLSFTFNRLFSSDSTDSLLCPK 419
           WL   S  A++K A+   +S  F+R+   D      CP+
Sbjct: 100 WLVTASQSALQKFASTDWMSNPFDRVVCGDFAGPNGCPR 138


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 86   SNNTWCLLKTPSFLSTKC 33
            S N W  L+  SFL+T C
Sbjct: 2313 SKNIWDALREKSFLTTDC 2330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,649
Number of Sequences: 2352
Number of extensions: 14105
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)