Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13e03
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.48
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.64
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.84
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.4 bits (53), Expect = 0.48
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 33 NLLT-LERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNYLNCTFDLLDD 176
N+LT ++ FK LF DL++N E AF+ Y T +L D+
Sbjct: 345 NMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDN 393
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.0 bits (52), Expect = 0.64
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 425 LAKFSVQESHHFTRIGRKQVRGVHVRA 345
L +F E+HH R GR+Q R + + A
Sbjct: 72 LLRFENPETHHPIRHGRRQSRSMDLNA 98
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.6 bits (51), Expect = 0.84
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 316 SKMSTVVRLHTNRNCGFTN 260
S ST+VR H N C TN
Sbjct: 335 STKSTIVRNHLNSTCSVTN 353
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 226 HTSSHYSRERSCSRDRNR 243
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 226 HTSSHYSRERSCSRDRNR 243
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 226 HTSSHYSRERSCSRDRNR 243
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 226 HTSSHYSRERSCSRDRNR 243
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 215 HTSSHYSRERSCSRDRNR 232
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 540 HTFAHHSNPRTRRRTKNR 487
HT +H+S R+ R +NR
Sbjct: 226 HTSSHYSRERSCSRDRNR 243
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -1
Query: 556 SNRGAAHIRTPFQSTYASSNKKPALPANTQP 464
S RG + + ++ K+PA P QP
Sbjct: 89 STRGEQEANLGYTNKMSTRGKRPASPGYVQP 119
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 582 YLLGEDMAKHFVDNNILPPHPS 647
Y G D H + LPP P+
Sbjct: 304 YFFGRDSVDHVDFDEFLPPPPN 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,077
Number of Sequences: 438
Number of extensions: 4193
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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