Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13e02
(718 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 235 8e-61
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 124 2e-27
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 75 2e-12
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 61 2e-08
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 52 1e-05
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 48 2e-04
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 48 3e-04
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 47 4e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 44 0.005
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 43 0.007
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 42 0.015
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 41 0.027
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 40 0.081
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 40 0.081
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 38 0.25
UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|R... 38 0.33
UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle virus|... 37 0.57
UniRef50_Q71EB6 Cluster: Replicase RdRp; n=1; Grapevine Red Glob... 35 1.7
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 34 3.0
UniRef50_A4E4Z5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_P36352 Cluster: RNA replicase polyprotein; n=2; Physali... 34 4.0
UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3; Tymovir... 34 4.0
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 34 4.0
UniRef50_A6F1T3 Cluster: Chemotaxis protein histidine kinase and... 33 9.3
UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1; Geo... 33 9.3
UniRef50_A7TLM6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 33 9.3
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 235 bits (575), Expect = 8e-61
Identities = 122/157 (77%), Positives = 123/157 (78%)
Frame = +3
Query: 246 MEEIVPLVVSAASAIPSLVDAFSSSKPPQTDTPPARSMDMQXXXXXXXXXXXXXXXXXXX 425
MEEIVPLVVSAASAIPSLV+AFSSSKPPQTD P ARSMDMQ
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAP 60
Query: 426 XXXXXXXXXXXXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 605
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE
Sbjct: 61 PPPLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 120
Query: 606 AVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPS 716
AVVFPSAPSLKIPVTVDLCWTTADVTVEG NVLATPS
Sbjct: 121 AVVFPSAPSLKIPVTVDLCWTTADVTVEGFNVLATPS 157
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 124 bits (299), Expect = 2e-27
Identities = 60/77 (77%), Positives = 60/77 (77%)
Frame = +2
Query: 2 LFDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLYXXXXXXXXXXXXXXXXF 181
LFDFFCRECSKEQKLALKIGEVPE LCQTMLSLGFSWLSRPLY F
Sbjct: 1671 LFDFFCRECSKEQKLALKIGEVPEHLCQTMLSLGFSWLSRPLYALLDRTARLRLLARTRF 1730
Query: 182 APLFSDPSVEGVLQLDF 232
APLFSDPSVEGVLQLDF
Sbjct: 1731 APLFSDPSVEGVLQLDF 1747
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +3
Query: 474 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 653
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 654 DLCWTTADVTVEGVNVLA 707
DLCWT VT +L+
Sbjct: 128 DLCWTIDSVTPARSEILS 145
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +3
Query: 474 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 653
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 654 DLCWTTADVTVEGVNVLAT 710
D W ++ V++ G +L+T
Sbjct: 131 DAHWHSSSVSITGSQILST 149
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +3
Query: 468 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 647
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 648 TVDLCWTTADVTVEGVNVLAT 710
DL W ++ + +L T
Sbjct: 91 HCDLIWVPSNSSASPKTILQT 111
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +3
Query: 477 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 656
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 657 LCWTTADVTVEGVNVLAT 710
L W A T +L T
Sbjct: 105 LIWVPASSTTTSSQILGT 122
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
FDFFCR ++ KLAL +GEVPE + Q + L SWLS +Y
Sbjct: 1742 FDFFCRRAPRDLKLALHLGEVPETIIQRLSHL--SWLSHAVY 1781
Score = 36.3 bits (80), Expect = 0.76
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 474 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 653
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 654 DLCWTTADV 680
WT A +
Sbjct: 1968 TAVWTIASI 1976
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +3
Query: 474 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 653
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 654 DLCWTTADVTVEGVNVL 704
DL W+T +V + +L
Sbjct: 1879 DLVWSTNNVIFTDLQIL 1895
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 2 LFDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLYXXXXXXXXXXXXXXXXF 181
++DFFCR S+EQK L IGEVP+ + ++ S + SR LY
Sbjct: 1697 VYDFFCRHASREQKQILNIGEVPDTVLSSIAS-HLRFASRALYCLLPSSVRRALTSKKTV 1755
Query: 182 APLFSDPSV 208
F DP V
Sbjct: 1756 TDAFEDPDV 1764
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +3
Query: 474 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 653
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 654 DLCWTTADVTVEGVNVL 704
L W + T ++L
Sbjct: 96 SLVWVPFNSTATSSDIL 112
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 477 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 656
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 657 LCWTTADVTVEGVNVLAT 710
+CW A+ V + T
Sbjct: 93 VCWVPANSPVTPAQITKT 110
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 477 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 656
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 657 LCWTTADVT 683
WT A ++
Sbjct: 2094 AVWTIASIS 2102
Score = 39.5 bits (88), Expect = 0.081
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
FDFFCR + KL+L +GEVPE + + W S +Y
Sbjct: 1880 FDFFCRRAPRHLKLSLMLGEVPESII-ARIGSSLKWASHAIY 1920
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +3
Query: 507 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 686
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 687 EGVNVL 704
++L
Sbjct: 104 SPTDIL 109
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 39.5 bits (88), Expect = 0.081
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
FDFFCR + K+ L++GE PE L G W S +Y
Sbjct: 1701 FDFFCRRAPAQAKVMLRLGEAPESLLSLAFE-GLKWASHSVY 1741
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 39.5 bits (88), Expect = 0.081
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 468 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 641
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 642 PVTVDLCWTTADVTVEGVNVL 704
P+TV L W A+ +L
Sbjct: 89 PLTVYLAWVPANSPATPTQIL 109
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 531 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 707
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILS 110
>UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|Rep:
Replicase - Grapevine fleck virus
Length = 1949
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
FD CR S + KLAL++GEVP+ + L +L+RPL+
Sbjct: 1876 FDLICRHASPQLKLALRLGEVPD-WGSLLSQLKLRFLTRPLF 1916
>UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle virus|Rep:
Replicase - Dulcamara mottle virus
Length = 1742
Score = 36.7 bits (81), Expect = 0.57
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 2 LFDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLYXXXXXXXXXXXXXXXXF 181
+++FFCR CS+ +KL L + + E + LS W+S+ L+
Sbjct: 1663 VYNFFCRHCSRSEKLLLTLDSIDESHLE-KLSYKVKWVSKTLFSMLPQKARDHFISASKI 1721
Query: 182 APLFSDPSVEGV 217
+ DPSV +
Sbjct: 1722 SSFPDDPSVSSL 1733
>UniRef50_Q71EB6 Cluster: Replicase RdRp; n=1; Grapevine Red Globe
virus|Rep: Replicase RdRp - Grapevine Red Globe virus
Length = 424
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLS 118
FDFFCR C KLAL+IG P+L L+L + L+
Sbjct: 267 FDFFCRNCPPSWKLALRIGS-PDLSFLDSLNLATTHLT 303
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 2 LFDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
+FDFFCR ++ K+ K+G V L +LS +WLS Y
Sbjct: 1773 VFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLS-KLTWLSYSSY 1814
>UniRef50_A4E4Z5 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes HPB2262|Rep: Putative
uncharacterized protein - Listeria monocytogenes HPB2262
Length = 225
Score = 33.9 bits (74), Expect = 4.0
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 213 VFCNWISDDLFMEEIVPLVVSAASAIPSLVDAFSSSKP 326
++C+++++D F+EEI+P + A S I ++ F S P
Sbjct: 57 IYCDYVNNDRFLEEIIPYI--ATSKIDGVIPGFEYSVP 92
>UniRef50_P36352 Cluster: RNA replicase polyprotein; n=2; Physalis
mottle virus|Rep: RNA replicase polyprotein - Physalis
mottle virus (PhMV) (Belladonna mottle virus-Iowa)
Length = 178
Score = 33.9 bits (74), Expect = 4.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPE 73
FDFFCR C+ QKL L +PE
Sbjct: 100 FDFFCRNCTPSQKLLLSNDPIPE 122
>UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3;
Tymovirus|Rep: RNA replicase polyprotein - Eggplant
mosaic virus
Length = 1839
Score = 33.9 bits (74), Expect = 4.0
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 8 DFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLYXXXXXXXXXXXXXXXXFAP 187
DFFCR C+ +K+ L + +PE L L W S+ +
Sbjct: 1762 DFFCRNCTPAEKILLSLDPIPESKI-LQLILKVRWASQAFFSYLPQKARELLVARSSLPS 1820
Query: 188 LFSDPSV 208
L+S+P V
Sbjct: 1821 LYSNPKV 1827
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 33.9 bits (74), Expect = 4.0
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 5 FDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRPLY 130
FD+FCR+ ++ QK+ L+ G V + ++L ++SRP Y
Sbjct: 1668 FDYFCRKATRSQKILLQPGLVDQETLD-KIALSAKFISRPFY 1708
>UniRef50_A6F1T3 Cluster: Chemotaxis protein histidine kinase and
related kinase; n=1; Marinobacter algicola DG893|Rep:
Chemotaxis protein histidine kinase and related kinase -
Marinobacter algicola DG893
Length = 2501
Score = 32.7 bits (71), Expect = 9.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 ISDDLFM-EEIVPLVVSAASAIPSLVDAFSSSKPPQTDT 341
I +FM ++I L+ +A+P LVD F +PP DT
Sbjct: 848 IDGSIFMNDDIAALLEDVTAALPELVDDFEKRQPPSRDT 886
>UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1;
Geobacter lovleyi SZ|Rep: Glycosyl transferase, group 1
- Geobacter lovleyi SZ
Length = 283
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 510 TETKSNSVTVQSLPNVSSI--IKGYRDAYLVNLEAVVF 617
TE V SLPN +SI ++GYRD YL + ++F
Sbjct: 63 TEFTGRGFNVISLPNYASIKLLEGYRDDYLTRTDRIIF 100
>UniRef50_A7TLM6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1131
Score = 32.7 bits (71), Expect = 9.3
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -3
Query: 707 GQHIDSFNCDVSSSPTKVNCDGYFEARGGRENDSLKIDKIRVAVAFYDGGD 555
G +ID VSSSP + DGYF REN S K+DK ++ + GD
Sbjct: 605 GLYIDITGLSVSSSPIRYTMDGYF-----RENYS-KLDKSKLVKELLEYGD 649
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 552 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 689
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVE 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,519,730
Number of Sequences: 1657284
Number of extensions: 12568799
Number of successful extensions: 36212
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 34778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36189
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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