Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13d22
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 433 VFLNDESRAIGYL*FFTGKRIYSPSVYYFY 344
           +F N     +  L +FT   ++ P +YYFY
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFY 216


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 176 FDCHHCYFCSYLVLAQHD*YI 114
           F+  HCY  + LVL   + YI
Sbjct: 813 FNAAHCYLATELVLMLKNRYI 833



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 176 FDCHHCYFCSYLVL 135
           F+  HCY  S LVL
Sbjct: 533 FNVVHCYLASELVL 546


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 170  NQSSYFRCILG 202
            N ++Y+RC+LG
Sbjct: 1114 NCNAYYRCVLG 1124


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 172 SKLLL*MHFRSHYRVYR 222
           +K +L  H +SH  VYR
Sbjct: 270 NKSMLNSHMKSHSNVYR 286


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 172 SKLLL*MHFRSHYRVYR 222
           +K +L  H +SH  VYR
Sbjct: 28  NKSMLNSHMKSHSNVYR 44


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +2

Query: 5    CQRHRRNVKCGKQKQSTMNLKLFRIFKTNTISKINYRCTSRVV 133
            C+       C ++       KLFR+ K++ +   +   T+RVV
Sbjct: 876  CKCENGKPTCWRECDKATCEKLFRMKKSSALRPASGGTTARVV 918


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 410 SHWISLIFYR*THLFSVRLLFLYTQQTPPKLPQRQL*NCI 291
           SH++ + F    H   + LL  Y       +    L NCI
Sbjct: 165 SHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCI 204


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 410 SHWISLIFYR*THLFSVRLLFLYTQQTPPKLPQRQL*NCI 291
           SH++ + F    H   + LL  Y       +    L NCI
Sbjct: 165 SHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCI 204


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 410 SHWISLIFYR*THLFSVRLLFLYTQQTPPKLPQRQL*NCI 291
           SH++ + F    H   + LL  Y       +    L NCI
Sbjct: 165 SHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCI 204


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 410 SHWISLIFYR*THLFSVRLLFLYTQQTPPKLPQRQL*NCI 291
           SH++ + F    H   + LL  Y       +    L NCI
Sbjct: 165 SHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCI 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,666
Number of Sequences: 336
Number of extensions: 2542
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)