Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13d15
         (229 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   0.83 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   1.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   1.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   7.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   7.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   7.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   7.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +1

Query: 7   GSAQVARCTVYYRIRAHFD*RQ-QEKKKLSSGQTTIFYKKSPQHYCGSNTFN 159
           GS      T Y+RI       +  E K  ++G  T+  K     YCG+ T N
Sbjct: 67  GSKCTWTITSYHRINLKCSLVEFSENKNCNAGSLTV-KKNFANKYCGNITLN 117


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 102 LAGTEFFLFLLPLIEVGTYSVVDGATGN 19
           +A T FFLFLL      T +++ G  GN
Sbjct: 283 VAFTIFFLFLLAWTPYATVALI-GVYGN 309


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 102 LAGTEFFLFLLPLIEVGTYSVVDGATGN 19
           +A T FFLFLL      T +++ G  GN
Sbjct: 283 VAFTIFFLFLLAWTPYATVALI-GVYGN 309


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 112 FYKKSPQHYCGS 147
           FYK+ PQ  C +
Sbjct: 580 FYKRRPQRACST 591


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 33  RLLQNTCPLRLAAARKEKTQF 95
           R+ +N   + LAA +K+K  F
Sbjct: 439 RVNENYKTVNLAAEKKDKNSF 459


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 62  ISGSKKRKNSVP 97
           + GS+KRK +VP
Sbjct: 194 LEGSQKRKFNVP 205


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 62  ISGSKKRKNSVP 97
           + GS+KRK +VP
Sbjct: 194 LEGSQKRKFNVP 205


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 33  RLLQNTCPLRLAAARKEKTQF 95
           R+ +N   + LAA +K+K  F
Sbjct: 439 RVNENYKTVNLAAEKKDKNSF 459


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,830
Number of Sequences: 438
Number of extensions: 970
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)