Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13d13
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl me...   222   3e-58
U37432-1|AAA80540.2|  226|Drosophila melanogaster protein D-aspa...   222   3e-58
AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p pro...   222   3e-58
AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p pro...   222   3e-58
AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA ...   222   3e-58
BT021305-1|AAX33453.1|  297|Drosophila melanogaster RE17490p pro...    37   0.028
AY061573-1|AAL29121.1|  252|Drosophila melanogaster SD02225p pro...    37   0.028
AE014134-3346|AAF53967.3|  310|Drosophila melanogaster CG9249-PA...    37   0.028
BT003167-1|AAO24922.1|  474|Drosophila melanogaster SD23052p pro...    31   1.1  
AY051841-1|AAK93265.1|  516|Drosophila melanogaster LD34544p pro...    31   1.1  
AE014297-1963|AAN13635.1|  474|Drosophila melanogaster CG6563-PB...    31   1.1  
AE014297-1962|AAF55147.1|  516|Drosophila melanogaster CG6563-PA...    31   1.1  

>U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl
           methyltransferase protein.
          Length = 226

 Score =  222 bits (543), Expect = 3e-58
 Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 5/188 (2%)
 Frame = +2

Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHISEL 457
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC    +   G     R+VGIEH +EL
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAEL 120

Query: 458 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 637
           V  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  P  LI+QL  
Sbjct: 121 VRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLAS 180

Query: 638 GGRLIVPV 661
           GGRLIVPV
Sbjct: 181 GGRLIVPV 188


>U37432-1|AAA80540.2|  226|Drosophila melanogaster protein
           D-aspartyl, L-isoaspartylmethyltransferase protein.
          Length = 226

 Score =  222 bits (543), Expect = 3e-58
 Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 5/188 (2%)
 Frame = +2

Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHISEL 457
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC    +   G     R+VGIEH +EL
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAEL 120

Query: 458 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 637
           V  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  P  LI+QL  
Sbjct: 121 VRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLAS 180

Query: 638 GGRLIVPV 661
           GGRLIVPV
Sbjct: 181 GGRLIVPV 188


>AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p
           protein.
          Length = 226

 Score =  222 bits (543), Expect = 3e-58
 Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 5/188 (2%)
 Frame = +2

Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHISEL 457
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC    +   G     R+VGIEH +EL
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAEL 120

Query: 458 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 637
           V  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  P  LI+QL  
Sbjct: 121 VRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLAS 180

Query: 638 GGRLIVPV 661
           GGRLIVPV
Sbjct: 181 GGRLIVPV 188


>AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p
           protein.
          Length = 226

 Score =  222 bits (543), Expect = 3e-58
 Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 5/188 (2%)
 Frame = +2

Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHISEL 457
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC    +   G     R+VGIEH +EL
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAEL 120

Query: 458 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 637
           V  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  P  LI+QL  
Sbjct: 121 VRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLAS 180

Query: 638 GGRLIVPV 661
           GGRLIVPV
Sbjct: 181 GGRLIVPV 188


>AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA
           protein.
          Length = 226

 Score =  222 bits (543), Expect = 3e-58
 Identities = 111/188 (59%), Positives = 132/188 (70%), Gaps = 5/188 (2%)
 Frame = +2

Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHISEL 457
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC    +   G     R+VGIEH +EL
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAEL 120

Query: 458 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 637
           V  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  P  LI+QL  
Sbjct: 121 VRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLAS 180

Query: 638 GGRLIVPV 661
           GGRLIVPV
Sbjct: 181 GGRLIVPV 188


>BT021305-1|AAX33453.1|  297|Drosophila melanogaster RE17490p
           protein.
          Length = 297

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
 Frame = +2

Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
           G+  L+VG G G LT  +A  LG   +V GI+   +L+  A ++++  +P L S+   K+
Sbjct: 104 GQNILEVGCGGGLLTEHLA-RLG--AQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKI 160

Query: 527 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 655
              D       E  Y A+ V           +L +A +  LKPGG + +
Sbjct: 161 EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 208


>AY061573-1|AAL29121.1|  252|Drosophila melanogaster SD02225p
           protein.
          Length = 252

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
 Frame = +2

Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
           G+  L+VG G G LT  +A  LG   +V GI+   +L+  A ++++  +P L S+   K+
Sbjct: 38  GQNILEVGCGGGLLTEHLA-RLG--AQVTGIDLGEKLIEAAREHLKCSSPELASNVVYKI 94

Query: 527 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 655
              D       E  Y A+ V           +L +A +  LKPGG + +
Sbjct: 95  EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 142


>AE014134-3346|AAF53967.3|  310|Drosophila melanogaster CG9249-PA
           protein.
          Length = 310

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
 Frame = +2

Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
           G+  L+VG G G LT  +A  LG   +V GI+   +L+  A ++++  +P L S+   K+
Sbjct: 96  GQNILEVGCGGGLLTEHLA-RLG--AQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKI 152

Query: 527 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 655
              D       E  Y A+ V           +L +A +  LKPGG + +
Sbjct: 153 EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 200


>BT003167-1|AAO24922.1|  474|Drosophila melanogaster SD23052p
           protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 212 AVDRKNYCPSSPYQDSPQSIGFSATISAPHMHA--HALEKLKNQ-LVPGEKALDVGSGSG 382
           +V R N C  + Y  S    G    + +  +    +    L+N+ +V G+  LDVG G+G
Sbjct: 154 SVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTG 213

Query: 383 YLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 490
            L +  A   G   RVVGI++ S++V  A   I+ +
Sbjct: 214 IL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 246


>AY051841-1|AAK93265.1|  516|Drosophila melanogaster LD34544p
           protein.
          Length = 516

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 212 AVDRKNYCPSSPYQDSPQSIGFSATISAPHMHA--HALEKLKNQ-LVPGEKALDVGSGSG 382
           +V R N C  + Y  S    G    + +  +    +    L+N+ +V G+  LDVG G+G
Sbjct: 196 SVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTG 255

Query: 383 YLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 490
            L +  A   G   RVVGI++ S++V  A   I+ +
Sbjct: 256 IL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 288


>AE014297-1963|AAN13635.1|  474|Drosophila melanogaster CG6563-PB,
           isoform B protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 212 AVDRKNYCPSSPYQDSPQSIGFSATISAPHMHA--HALEKLKNQ-LVPGEKALDVGSGSG 382
           +V R N C  + Y  S    G    + +  +    +    L+N+ +V G+  LDVG G+G
Sbjct: 154 SVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTG 213

Query: 383 YLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 490
            L +  A   G   RVVGI++ S++V  A   I+ +
Sbjct: 214 IL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 246


>AE014297-1962|AAF55147.1|  516|Drosophila melanogaster CG6563-PA,
           isoform A protein.
          Length = 516

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 212 AVDRKNYCPSSPYQDSPQSIGFSATISAPHMHA--HALEKLKNQ-LVPGEKALDVGSGSG 382
           +V R N C  + Y  S    G    + +  +    +    L+N+ +V G+  LDVG G+G
Sbjct: 196 SVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTG 255

Query: 383 YLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 490
            L +  A   G   RVVGI++ S++V  A   I+ +
Sbjct: 256 IL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,791,873
Number of Sequences: 53049
Number of extensions: 682296
Number of successful extensions: 2069
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2064
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)