Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13d13
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15129-1|AAB60240.1| 225|Caenorhabditis elegans protein-L-isoas... 222 2e-58
U09669-1|AAA82166.1| 225|Caenorhabditis elegans protein-L-isoas... 222 2e-58
AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein carbo... 222 2e-58
AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein carbo... 201 4e-52
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 34 0.078
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 34 0.078
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 33 0.24
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125959-4|AAD14730.2| 532|Caenorhabditis elegans Udp-glucurono... 29 2.9
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 29 2.9
U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical p... 29 3.9
Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical pr... 28 5.1
U97009-13|AAZ94736.1| 456|Caenorhabditis elegans Udp-glucuronos... 28 5.1
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 28 5.1
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 5.1
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 5.1
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.1
U97009-8|AAC69032.1| 534|Caenorhabditis elegans Udp-glucuronosy... 28 6.8
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 28 6.8
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical pr... 27 9.0
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 27 9.0
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 27 9.0
>U15129-1|AAB60240.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 222 bits (542), Expect = 2e-58
Identities = 102/183 (55%), Positives = 135/183 (73%)
Frame = +2
Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
MAWRS G+ N +LI NLR N + S +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1 MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60
Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 472
APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +LV L+
Sbjct: 61 APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120
Query: 473 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 652
KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180
Query: 653 VPV 661
+PV
Sbjct: 181 IPV 183
>U09669-1|AAA82166.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 222 bits (542), Expect = 2e-58
Identities = 102/183 (55%), Positives = 135/183 (73%)
Frame = +2
Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
MAWRS G+ N +LI NLR N + S +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1 MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60
Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 472
APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +LV L+
Sbjct: 61 APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120
Query: 473 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 652
KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180
Query: 653 VPV 661
+PV
Sbjct: 181 IPV 183
>AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform a protein.
Length = 225
Score = 222 bits (542), Expect = 2e-58
Identities = 102/183 (55%), Positives = 135/183 (73%)
Frame = +2
Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
MAWRS G+ N +LI NLR N + S +AM +VDR ++ P +PY+D+PQ IG++AT+S
Sbjct: 1 MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNATVS 60
Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 472
APHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +LV L+
Sbjct: 61 APHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 120
Query: 473 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 652
KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL GGR++
Sbjct: 121 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 180
Query: 653 VPV 661
+PV
Sbjct: 181 IPV 183
>AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform b protein.
Length = 219
Score = 201 bits (490), Expect = 4e-52
Identities = 97/183 (53%), Positives = 129/183 (70%)
Frame = +2
Query: 113 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 292
MAWRS G+ N +LI NLR N + S +AM +VDR ++ P +PY+D+PQ IG++AT
Sbjct: 1 MAWRSSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRAPYEDAPQRIGYNAT-- 58
Query: 293 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLAT 472
HA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +LV L+
Sbjct: 59 ----HAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSE 114
Query: 473 KNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLI 652
KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL GGR++
Sbjct: 115 KNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMM 174
Query: 653 VPV 661
+PV
Sbjct: 175 IPV 177
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 44.8 bits (101), Expect = 6e-05
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
Frame = +2
Query: 134 ANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSS-------PYQDSPQSIG----FS 280
+ N DLI L N I+ + A VDR ++ P S P S + G +
Sbjct: 6 SQNDDLIDFLVKNDTIRRRNIERAFRLVDRSDFLPISERKFTRLPSLTSTEPGGPFYPGA 65
Query: 281 ATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELV 460
+ A ++A + L L G L +G+GSGYL+ ++LGETG GIE LV
Sbjct: 66 LRVGAIDIYAKLFDYL--DLRKGHSFLHIGTGSGYLSTIAGILLGETGINHGIELYENLV 123
Query: 461 NLATKNIQN--DNPSLLS----SERIKLV-VGDGRLGYPSEAPYSAIHVGAAA--PTLPQ 613
+ I P S +K+ + D + + Y I VG A L +
Sbjct: 124 TYSETCIDQWITTPEASSVGWARPELKVCDITDVKFLEAHQNRYDRIFVGFVADDSQLLK 183
Query: 614 ALIDQLKPGGRLIVP 658
++ L GG+L++P
Sbjct: 184 RMLGMLNVGGQLVMP 198
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 34.3 bits (75), Expect = 0.078
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 350 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 520
++ALD+G +G+LT +A R++GI+ L+ +A KNI++ D+ + +S +
Sbjct: 153 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 211
Query: 521 KLVVGDGRLGYPSEAPYS 574
V G + +EAP S
Sbjct: 212 SFGVQFGTVSQRNEAPRS 229
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 34.3 bits (75), Expect = 0.078
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 350 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 520
++ALD+G +G+LT +A R++GI+ L+ +A KNI++ D+ + +S +
Sbjct: 150 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 208
Query: 521 KLVVGDGRLGYPSEAPYS 574
V G + +EAP S
Sbjct: 209 SFGVQFGTVSQRNEAPRS 226
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SSPYQDSPQSIGFSATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGE 418
SS + P S + H+ LEKL + +K LD+G G+G L + + G
Sbjct: 2 SSDFPTDPYSTAQQKWLYQDHLVLPTLEKLLKYNLKDKKVLDIGCGNG-LNSTTFLQWG- 59
Query: 419 TGRVVGIEHISELV 460
+VVG ++ E++
Sbjct: 60 ARKVVGFDNSQEMI 73
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 31.1 bits (67), Expect = 0.73
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +2
Query: 386 LTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEA 565
+T A M+GE+ +G+ + TKN P+ L G G LG P
Sbjct: 577 MTNDYASMVGESQ--IGMNPVGNYHVFGTKNNHRQVPAPSQVTSSSLTNGSGGLGGPPPT 634
Query: 566 PYSAIHVGAAAPTLPQALID 625
P S+ V AA+P Q ++
Sbjct: 635 PLSSTMVLAASPIQSQNAVN 654
>Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical
protein W06D11.4 protein.
Length = 365
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 302 MHAHALEKLKNQLV--PGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATK 475
+H + +QL P + +D+GSG G+L +A T VG+E + L +A K
Sbjct: 172 LHCSQMASFVDQLNMGPSDYFMDLGSGIGHLVNFVA-AYARTQMSVGVELMDNLAEIAEK 230
Query: 476 N 478
N
Sbjct: 231 N 231
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQ 484
G+K +D+G G G L A M E V+G++ E + + ++N++
Sbjct: 48 GKKLIDIGCGCGMLMTTAATMY-ELETVLGVDIDDEALKICSRNLE 92
>Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical
protein ZC455.6a protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 440 EHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSA 577
E+I + V+L+T Q SLL+ +R+KL + G LG E YSA
Sbjct: 351 ENIPDNVHLSTWFPQQ---SLLADKRVKLFITHGGLGSTMELAYSA 393
>AF125959-4|AAD14730.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein13 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG +E Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTTEVAYT 390
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +2
Query: 236 PSSPYQDSPQSIGFSATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLG 415
PS Y ++ Q + H+ ++K ++ G++ LDVG G+G+ + +
Sbjct: 5 PSEAYTEAQQK-----WLGRDHLITPTIKKAFGHILVGKEVLDVGCGNGHYS--FDFLRW 57
Query: 416 ETGRVVGIEHISELVNLATKNIQNDN 493
+V G+++ E++ + + +N
Sbjct: 58 GAHKVFGVDNSEEMIQICKSSPDFEN 83
>U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical
protein K12D9.1 protein.
Length = 391
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
G + LDVG G G+ + +A ++ + VG++ + + A N ++D + ++
Sbjct: 203 GFRVLDVGCGEGFHSCLLAENYSKS-QFVGLDICEKAIKSAKLNKKSDGSDF---QNLEF 258
Query: 527 VVGDGRL 547
VVGD +
Sbjct: 259 VVGDAMI 265
>Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical
protein M163.8 protein.
Length = 137
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 565 PLQCNSCRGCSSHFTTSSN*SIETGREANSSC 660
P C C G SS ++S++ S T ++NS+C
Sbjct: 52 PASCRLCSGASSTTSSSASSSSSTCGDSNSNC 83
>U97009-13|AAZ94736.1| 456|Caenorhabditis elegans
Udp-glucuronosyltransferase protein10 protein.
Length = 456
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG E Y+
Sbjct: 286 PSLLADKRVKLFVTHGGLGSTMEVAYT 312
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG E Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTMEVAYT 390
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 227 NYCPSSPYQDSPQSIGFSA-TISAPHMHAHALEKLKNQL 340
N CP P+ D P+ + + T+S P MH+H K + L
Sbjct: 265 NLCPRVPF-DRPELMDMARLTVSLPLMHSHECVKFDDDL 302
>U97009-8|AAC69032.1| 534|Caenorhabditis elegans
Udp-glucuronosyltransferase protein12 protein.
Length = 534
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL + G LG E Y+
Sbjct: 366 PSLLADKRVKLFITHGGLGSTMEVAYT 392
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 494 PSLLSSERIKLVVGDGRLGYPSEAPYS 574
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRLKLFVTHGGLGSTMEVAYT 391
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 437 IEHISELVNLATKNIQNDNPSLLSSERIKLV 529
++ I+ N +I+ND PS+LSS I+L+
Sbjct: 821 VQPITSNANSEIDSIENDRPSILSSSGIQLL 851
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 437 IEHISELVNLATKNIQNDNPSLLSSERIKLV 529
++ I+ N +I+ND PS+LSS I+L+
Sbjct: 821 VQPITSNANSEIDSIENDRPSILSSSGIQLL 851
>Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical
protein C54G10.3 protein.
Length = 660
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 278 SATISAPHMHAHALEKLKN-QLVPGEKALDVG-SGSG 382
SAT+S P+ H+H + +L + Q++ G+ L G SG G
Sbjct: 426 SATLSPPNDHSHLIVQLLSLQIIQGQTLLITGDSGCG 462
>Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical
protein AC3.7 protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 440 EHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYS 574
+ I L N A P+LL+ R+KL V G LG E YS
Sbjct: 343 QFIERLPNNAILKKWVPQPALLADPRLKLFVTHGGLGSTLEVAYS 387
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
G+K L++GSG+G +A + G V I + E + L KN++ + L+ RIK+
Sbjct: 54 GKKVLELGSGTGVGGIALAAL----GADVIITDLPERLALIEKNVEANRK--LTGNRIKV 107
Query: 527 VVGD 538
V D
Sbjct: 108 QVLD 111
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 347 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 526
G+K L++GSG+G +A + G V I + E + L KN++ + L+ RIK+
Sbjct: 15 GKKVLELGSGTGVGGIALAAL----GADVIITDLPERLALIEKNVEANRK--LTGNRIKV 68
Query: 527 VVGD 538
V D
Sbjct: 69 QVLD 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,533,460
Number of Sequences: 27780
Number of extensions: 338421
Number of successful extensions: 875
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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