Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13d08
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 334 3e-92
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 331 3e-91
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 330 7e-91
SB_56| Best HMM Match : Actin (HMM E-Value=0) 328 2e-90
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 327 5e-90
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_54| Best HMM Match : Actin (HMM E-Value=0) 113 1e-25
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 100 8e-22
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 80 2e-15
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 71 5e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 39 0.003
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.53
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.53
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.71
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.71
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.93
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.93
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 30 1.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.2
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.2
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.2
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.2
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.9
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 3.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 8.7
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 27 8.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 27 8.7
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 27 8.7
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 27 8.7
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 334 bits (821), Expect = 3e-92
Identities = 154/161 (95%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGV+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 161
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 331 bits (813), Expect = 3e-91
Identities = 152/161 (94%), Positives = 158/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGVS
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVS 161
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 330 bits (810), Expect = 7e-91
Identities = 153/161 (95%), Positives = 158/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGV+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 161
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 328 bits (806), Expect = 2e-90
Identities = 152/159 (95%), Positives = 157/159 (98%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTX 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGV+
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 160
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 327 bits (803), Expect = 5e-90
Identities = 151/159 (94%), Positives = 157/159 (98%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTX 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGV+
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 160
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +3
Query: 459 NREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
N + M IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+ SGDGV+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 123
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 162 bits (393), Expect = 2e-40
Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
Frame = +3
Query: 132 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 305
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 306 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTXI 482
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM +
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 483 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
MFE + +Y+AIQAVL+LYA G TG+V+ SGDGV+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVT 164
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 113 bits (272), Expect = 1e-25
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLY 545
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 546 ASGRTTGIVLXSGDGVS 596
ASGRTTG V GDGVS
Sbjct: 2189 ASGRTTGTVFDCGDGVS 2205
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 100 bits (240), Expect = 8e-22
Identities = 43/61 (70%), Positives = 54/61 (88%)
Frame = +3
Query: 414 EHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGV 593
+HPVLLTEAPLNP+ NREK + FETFN PA+++++QAVLSLYA+GRTTG+VL +GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 594 S 596
S
Sbjct: 186 S 186
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/87 (37%), Positives = 57/87 (65%)
Frame = +3
Query: 324 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNT 503
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T +MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 504 PAMYVAIQAVLSLYASGRTTGIVLXSG 584
PA ++ +VL+ +A+GR+ G+V+ SG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V SGDGVS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVS 39
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 108 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 278
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 279 GDEAQSKRGILTL 317
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 525 QAVLSLYASGRTTGIVLXSG 584
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 126 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 305
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 306 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 395
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 236 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 120
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +3
Query: 369 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYA 548
I H F + L+V P +H V++T +E++ I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 549 SGRTTGIV 572
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 467
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 182 CETGLAHT 159
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 182 CETGLAHT 159
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 182 CETGLAHT 159
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.71
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 182 CETGLAHT 159
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 182 CETGLAHT 159
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 182 CETGLAHT 159
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 182 CETGLAHT 159
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 456 ANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
A +E++ I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 440 SPQPQGQQREDDPXHVRNIQHARHVRRHPSR 532
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 520 PSKPCSRCTRPVVPP 564
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 293 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 444 LNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 182 CETGLAHT 159
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 182 CETGLAHT 159
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 299 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 135
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 134 GNFFVAHLE 108
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSC 573
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -1
Query: 595 ETPSPEXSTIPVVRPDAYSESTAWMATYMAGVLNVSNMXWVIFSLLALG--LRGASVSRT 422
ETPSP + P PDA TAW + L S V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 421 G 419
G
Sbjct: 147 G 147
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 595 ETPSPEXSTIPVVRPDAYSESTAW 524
ETP+PE + P PDA TAW
Sbjct: 154 ETPTPELESAPAAMPDA--TDTAW 175
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCXTPATVSP 597
PP T P+ P S V PP + TPAT P
Sbjct: 332 PPVTEPAPPSS----VVAPPPAVPTPATAPP 358
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 226 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 116
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 293 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 27.5 bits (58), Expect = 8.7
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Frame = -1
Query: 598 WE--TPSPEXSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMXWVIFSLLALGL 446
WE T P T+P + D Y S +W+ VL N +++F +LGL
Sbjct: 4 WELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLGL 62
Query: 445 RGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 284
A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 63 AHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 494 IQHARHVRRHPSRALAVRVRSYHRYRAXLRRR 589
I H++ RH S+ L R R HR + RR
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRR 1619
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 493 HSTRP-PCTSPSKPCSRCTRPVVPPVSCXTPATVSP 597
H+T P P T PS P C + P C T T+SP
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSP 699
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 282 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 136
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 288 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 118
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,287,391
Number of Sequences: 59808
Number of extensions: 520865
Number of successful extensions: 3590
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3576
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -