Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13d08
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 337 3e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 337 3e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 337 3e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 337 3e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 337 3e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 337 3e-93
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 336 5e-93
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 335 2e-92
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 326 7e-90
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 299 1e-81
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 244 3e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 205 2e-53
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 9e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 162 1e-40
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 134 3e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 97 8e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 49 3e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.038
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.12
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.15
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 33 0.20
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.20
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 337 bits (829), Expect = 3e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 336 bits (827), Expect = 5e-93
Identities = 156/161 (96%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 335 bits (823), Expect = 2e-92
Identities = 154/161 (95%), Positives = 159/161 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
T IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL SGDGV+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 326 bits (801), Expect = 7e-90
Identities = 150/159 (94%), Positives = 156/159 (98%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTX 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
IMFETFNTPAMYV IQAVLSLYASGRTTGIVL +GDGV+
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVT 160
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 299 bits (733), Expect = 1e-81
Identities = 138/143 (96%), Positives = 141/143 (98%)
Frame = +3
Query: 168 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 347
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 348 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQ 527
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 528 AVLSLYASGRTTGIVLXSGDGVS 596
AVLSLYASGRTTG+VL SGDGV+
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVT 147
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 244 bits (598), Expect = 3e-65
Identities = 113/117 (96%), Positives = 115/117 (98%)
Frame = +3
Query: 246 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 425
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 426 LLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
LLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VL SGDGV+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 117
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 205 bits (501), Expect = 2e-53
Identities = 90/154 (58%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 317
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 318 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 494
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 495 FNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
FN PA+Y+ +QAVLSLYA+GRTTG+VL SGDGV+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVT 164
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 9e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDM 362
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 162 bits (394), Expect = 1e-40
Identities = 80/156 (51%), Positives = 108/156 (69%), Gaps = 3/156 (1%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 311
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 312 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTXIMF 488
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 489 ETFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
E + ++YVA+QAVL+LYA G TG+V+ SGDGV+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVT 164
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 134 bits (325), Expect = 3e-32
Identities = 77/182 (42%), Positives = 102/182 (56%), Gaps = 21/182 (11%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 257
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 258 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 434
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 435 EAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLXSGDG 590
E PLN NRE IMFE+FN P +Y+A+QAVL+L AS + TG+V+ SGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 591 VS 596
V+
Sbjct: 181 VT 182
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 97.1 bits (231), Expect = 8e-21
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 296
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 297 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 432 TEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLXSG 584
+E+ N +A REK+T IMFE F PA Y++ VLS +A GRT G+++ SG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +3
Query: 129 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 308
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 309 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMF 488
++ PIE G V NWD ++IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 489 ETF 497
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +3
Query: 129 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 308
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 309 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMF 488
++ PIE G V NWD ++IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 489 ETF 497
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 35.9 bits (79), Expect = 0.022
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 311
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 312 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFE 491
+E + D+ K EL+V P ++ VLL+ P ++ I E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 492 TFNTPAMYVAIQAVLSLYASGRTTGIVLXSGDGVS 596
+ + Q L LYA TTG+V+ G+ V+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVN 333
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.038
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +2
Query: 209 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 388
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 389 Q*AACRPRGTPRPAH*GSPQPQG 457
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +2
Query: 221 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 400
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 401 CRPRGTPRPAH*GSPQPQG 457
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.15
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 442 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 263
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 262 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 119
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 496 STRPPCTSPSKPCSRCTRPVVPPVSCXTPATVS 594
ST P T+P P S T P VPPV+ TP T +
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTT 690
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 496 STRPPCTSPSKPCSRCTRPVVPPVSCXTPATVS 594
ST P T+P P S T P VPPV+ TP T +
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTT 746
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 496 STRPPCTSPSKPCSRCTRPVVPPVSCXTPATVS 594
ST P T+P P S T P VPPV+ TP T +
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTT 569
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +1
Query: 376 IIPSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPV 555
I+P MS +SP ++PS + C +T C+ S P + CTR
Sbjct: 155 IVPKRMSSLSPSTSSPSNTENPCSKCPLGSACRNGNCIPLTTSNLCSDGSPPNNTCTR-- 212
Query: 556 VPPVSC 573
P SC
Sbjct: 213 -DPYSC 217
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 592 TPSPEXSTIPVVRPDAYSESTAWMATYMAGVL 497
TP P ST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 300 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 145
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 300 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 145
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 2 IPRSELGSLRCTAITKLCNSKLIYLFIIE 88
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 394 SCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPP--CTSPSKPCSRCTRPVVPP 564
+C PR +PSC C S P C P P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 168 KAGFAGDDAPRAVFPSIVGRPRHQG 242
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 218 RGKAPPSGRDGRYGTEG 268
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 353 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 243
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,492
Number of Sequences: 27780
Number of extensions: 351603
Number of successful extensions: 1386
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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