Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13d02
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.8  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 504 VDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINM 608
           VDE +SY+ L++ A+  L +L     S+ +++ N+
Sbjct: 283 VDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNL 317


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 504 VDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINM 608
           VDE +SY+ L++ A+  L +L     S+ +++ N+
Sbjct: 283 VDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNL 317


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 504 VDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINM 608
           VDE +SY+ L++ A+  L +L     S+ +++ N+
Sbjct: 283 VDEEISYIVLMSFASDLLFILIQLFNSLRQMKNNL 317


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LHIQVQVGGAPLPDVQEL 431
           L I+  +GG  LPD+ E+
Sbjct: 344 LEIKPVLGGTALPDISEI 361


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LHIQVQVGGAPLPDVQEL 431
           L I+  +GG  LPD+ E+
Sbjct: 344 LEIKPVLGGTALPDISEI 361


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LHIQVQVGGAPLPDVQEL 431
           L I+  +GG  LPD+ E+
Sbjct: 344 LEIKPVLGGTALPDISEI 361


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LHIQVQVGGAPLPDVQEL 431
           L I+  +GG  LPD+ E+
Sbjct: 344 LEIKPVLGGTALPDISEI 361


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 287 NEYTFEASFRHIFGISRYSRIVDCEIIVQRCED 189
           N Y F +S   +F +     I +  I  Q CE+
Sbjct: 180 NPYCFNSSVYKVFPVEHLLFIANAFITSQSCEN 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,451
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)