Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c22
         (280 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   1.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   2.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    20   4.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    20   4.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    20   4.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    20   4.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    20   4.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   5.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   5.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   5.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     19   9.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    19   9.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    19   9.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           19   9.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    19   9.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 84  KNFYFCIYLNNVLF 43
           KNFYF   L  V+F
Sbjct: 135 KNFYFWFVLKQVMF 148


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 72  FCIYLNNVLFKQ*MLNFEKV 13
           F  Y  N+LF++ +LN  K+
Sbjct: 83  FLTYFFNILFRKKLLNAVKI 102


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 218 VIKQILRCYSINRRSEQPLHFHIT 147
           ++ QI+  + +N  +E+P   H T
Sbjct: 33  LLSQIVGVFPLNHLNEEPEKLHFT 56


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 72  FCIYLNNVLFKQ*MLNFEKV 13
           F  Y  N+LF++ +LN  K+
Sbjct: 79  FLTYFFNILFRKKLLNAVKI 98


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  KYKNKNSYIPVF 98
           KY NK S +P++
Sbjct: 398 KYHNKTSSVPIY 409


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  KYKNKNSYIPVF 98
           KY NK S +P++
Sbjct: 398 KYHNKTSSVPIY 409


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  KYKNKNSYIPVF 98
           KY NK S +P++
Sbjct: 398 KYHNKTSSVPIY 409


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  KYKNKNSYIPVF 98
           KY NK S +P++
Sbjct: 398 KYHNKTSSVPIY 409


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  KYKNKNSYIPVF 98
           KY NK S +P++
Sbjct: 397 KYHNKTSSVPIY 408


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 87  IPVFIAIVSRHIISRFLTKTSYV 155
           IPV + ++S      F+++TSY+
Sbjct: 13  IPVSVILISVGWWENFVSETSYL 35


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 87  IPVFIAIVSRHIISRFLTKTSYV 155
           IPV + ++S      F+++TSY+
Sbjct: 246 IPVSVILISVGWWENFVSETSYL 268


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 87  IPVFIAIVSRHIISRFLTKTSYV 155
           IPV + ++S      F+++TSY+
Sbjct: 246 IPVSVILISVGWWENFVSETSYL 268


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 166  GCSDRLFME*HRRIC 210
            GCS+R F     RIC
Sbjct: 1110 GCSNRCFFPSKIRIC 1124


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 80  FLHPSFHSH 106
           + HP  HSH
Sbjct: 84  YYHPQLHSH 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 80  FLHPSFHSH 106
           + HP  HSH
Sbjct: 84  YYHPQLHSH 92


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 173 LTVCLWNNIAGFV 211
           LT C+ + IAGF+
Sbjct: 5   LTACVGSAIAGFL 17


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 80  FLHPSFHSH 106
           + HP  HSH
Sbjct: 84  YYHPQLHSH 92


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 80  FLHPSFHSH 106
           + HP  HSH
Sbjct: 84  YYHPQLHSH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,099
Number of Sequences: 336
Number of extensions: 1066
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)