Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c22
         (280 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028373-1|AAH28373.1|  339|Homo sapiens RNA (guanine-9-) methyl...    63   1e-10
AF106046-1|AAD21019.1|  233|Homo sapiens unknown protein.              56   2e-08
BC057774-1|AAH57774.1|  316|Homo sapiens RNA (guanine-9-) methyl...    36   0.030
AL138752-9|CAI13882.1|  221|Homo sapiens RNA (guanine-9-) methyl...    36   0.030
AL138752-8|CAI13881.1|  316|Homo sapiens RNA (guanine-9-) methyl...    36   0.030
AK092718-1|BAC03957.1|  221|Homo sapiens protein ( Homo sapiens ...    36   0.030
AK056017-1|BAB71074.1|  319|Homo sapiens protein ( Homo sapiens ...    36   0.030
BC035967-1|AAH35967.2|  397|Homo sapiens RG9MTD1 protein protein.      31   0.86 
AY561707-1|AAS66980.1|  397|Homo sapiens HBV pre-S2 trans-regula...    31   0.86 
AK000439-1|BAA91166.1|  252|Homo sapiens protein ( Homo sapiens ...    31   0.86 
AF226052-1|AAF86952.1|  403|Homo sapiens HNYA protein.                 31   0.86 

>BC028373-1|AAH28373.1|  339|Homo sapiens RNA (guanine-9-)
           methyltransferase domain containing 2 protein.
          Length = 339

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKSRNDMSRHN-GYE 96
           LIID SF HLM+ KD  K+ KQI RCY+ NRR+  P+ F++TS G + + +M  ++ G+ 
Sbjct: 103 LIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWV 162

Query: 95  NW 90
           NW
Sbjct: 163 NW 164


>AF106046-1|AAD21019.1|  233|Homo sapiens unknown protein.
          Length = 233

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 257 SFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKSRNDMSRHN-GYENW 90
           SF HLM+ KD  K+ KQI RCY+ NRR+  P+ F++TS G + + +M  ++ G+ NW
Sbjct: 2   SFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNW 58


>BC057774-1|AAH57774.1|  316|Homo sapiens RNA (guanine-9-)
           methyltransferase domain containing 3 protein.
          Length = 316

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF 141
           L IDLS  H M +K+  ++  QI R Y  N+++++P    +T F
Sbjct: 127 LCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGF 170


>AL138752-9|CAI13882.1|  221|Homo sapiens RNA (guanine-9-)
           methyltransferase domain containing 3 protein.
          Length = 221

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF 141
           L IDLS  H M +K+  ++  QI R Y  N+++++P    +T F
Sbjct: 32  LCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGF 75


>AL138752-8|CAI13881.1|  316|Homo sapiens RNA (guanine-9-)
           methyltransferase domain containing 3 protein.
          Length = 316

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF 141
           L IDLS  H M +K+  ++  QI R Y  N+++++P    +T F
Sbjct: 127 LCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGF 170


>AK092718-1|BAC03957.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35399 fis, clone SKNSH2004039. ).
          Length = 221

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF 141
           L IDLS  H M +K+  ++  QI R Y  N+++++P    +T F
Sbjct: 32  LCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGF 75


>AK056017-1|BAB71074.1|  319|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31455 fis, clone NT2NE2001156. ).
          Length = 319

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF 141
           L IDLS  H M +K+  ++  QI R Y  N+++++P    +T F
Sbjct: 127 LCIDLSMTHYMSKKELSRLAGQIRRLYGSNKKADRPFWICLTGF 170


>BC035967-1|AAH35967.2|  397|Homo sapiens RG9MTD1 protein protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF---GEKSRNDMSRHNG 102
           L+ D+++ + M  K+    + Q+L     NRR+  P H +  +    G   R  + R+  
Sbjct: 199 LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQ- 257

Query: 101 YENWD 87
            E WD
Sbjct: 258 -EKWD 261


>AY561707-1|AAS66980.1|  397|Homo sapiens HBV pre-S2 trans-regulated
           protein 2 protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF---GEKSRNDMSRHNG 102
           L+ D+++ + M  K+    + Q+L     NRR+  P H +  +    G   R  + R+  
Sbjct: 199 LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQ- 257

Query: 101 YENWD 87
            E WD
Sbjct: 258 -EKWD 261


>AK000439-1|BAA91166.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20432 fis, clone KAT03764. ).
          Length = 252

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF---GEKSRNDMSRHNG 102
           L+ D+++ + M  K+    + Q+L     NRR+  P H +  +    G   R  + R+  
Sbjct: 54  LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQ- 112

Query: 101 YENWD 87
            E WD
Sbjct: 113 -EKWD 116


>AF226052-1|AAF86952.1|  403|Homo sapiens HNYA protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSF---GEKSRNDMSRHNG 102
           L+ D+++ + M  K+    + Q+L     NRR+  P H +  +    G   R  + R+  
Sbjct: 205 LVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQ- 263

Query: 101 YENWD 87
            E WD
Sbjct: 264 -EKWD 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,764,372
Number of Sequences: 237096
Number of extensions: 501257
Number of successful extensions: 553
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)