Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c22
         (280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089688-1|AAL90426.1|  319|Drosophila melanogaster RH65902p pro...    56   7e-09
AE014298-3180|AAF50950.1|  319|Drosophila melanogaster CG14618-P...    56   7e-09
AY119619-1|AAM50273.1|  446|Drosophila melanogaster LD44982p pro...    32   0.13 
AE013599-2706|AAF57683.1|  446|Drosophila melanogaster CG5190-PA...    32   0.13 
Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like pro...    26   8.2  
X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like pro...    26   8.2  
AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p pro...    26   8.2  
AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB...    26   8.2  
AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA...    26   8.2  

>AY089688-1|AAL90426.1|  319|Drosophila melanogaster RH65902p
           protein.
          Length = 319

 Score = 56.0 bits (129), Expect = 7e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -3

Query: 266 IDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKS--RNDMSRHNGYEN 93
           IDL +  LM E+D  K +KQ LR Y+INRRS QP + H T             ++ G+EN
Sbjct: 99  IDLDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESFKKNEGWEN 158

Query: 92  WDVR 81
           W V+
Sbjct: 159 WHVQ 162


>AE014298-3180|AAF50950.1|  319|Drosophila melanogaster CG14618-PA
           protein.
          Length = 319

 Score = 56.0 bits (129), Expect = 7e-09
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -3

Query: 266 IDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQPLHFHITSFGEKS--RNDMSRHNGYEN 93
           IDL +  LM E+D  K +KQ LR Y+INRRS QP + H T             ++ G+EN
Sbjct: 99  IDLDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESFKKNEGWEN 158

Query: 92  WDVR 81
           W V+
Sbjct: 159 WHVQ 162


>AY119619-1|AAM50273.1|  446|Drosophila melanogaster LD44982p
           protein.
          Length = 446

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQP--LHFHITSFGEKSRNDMSRH 108
           +++D S+   M  ++     KQ++ C++ NR +++P  LH+  T    +    + R+
Sbjct: 193 MVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSRCMQSLQRY 249


>AE013599-2706|AAF57683.1|  446|Drosophila melanogaster CG5190-PA
           protein.
          Length = 446

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = -3

Query: 272 LIIDLSFGHLMIEKDRFKVIKQILRCYSINRRSEQP--LHFHITSFGEKSRNDMSRH 108
           +++D S+   M  ++     KQ++ C++ NR +++P  LH+  T    +    + R+
Sbjct: 193 MVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSRCMQSLQRY 249


>Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like
           protein.
          Length = 356

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 51  HYLNKYKNKNSYIPVFIAIVSRHIISRFLTKTSYVKMQWLF*PSVYGITSQDLFDHFKPI 230
           HY+N Y   NS   VF  + SR   S    +   +K + L      G++  DL+++F P 
Sbjct: 204 HYVNSYTTGNSLYQVF--VYSRKNYSMIKER---IKSKGL-----NGLSKLDLYNYFAPW 253

Query: 231 FFNH 242
           F  H
Sbjct: 254 FAAH 257


>X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like
           protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 51  HYLNKYKNKNSYIPVFIAIVSRHIISRFLTKTSYVKMQWLF*PSVYGITSQDLFDHFKPI 230
           HY+N Y   NS   VF  + SR   S    +   +K + L      G++  DL+++F P 
Sbjct: 201 HYVNSYTTGNSLYQVF--VYSRKNYSMIKER---IKSKGL-----NGLSKLDLYNYFAPW 250

Query: 231 FFNH 242
           F  H
Sbjct: 251 FAAH 254


>AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p
           protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 51  HYLNKYKNKNSYIPVFIAIVSRHIISRFLTKTSYVKMQWLF*PSVYGITSQDLFDHFKPI 230
           HY+N Y   NS   VF  + SR   S    +   +K + L      G++  DL+++F P 
Sbjct: 201 HYVNSYTTGNSLYQVF--VYSRKNYSMIKER---IKSKGL-----NGLSKLDLYNYFAPW 250

Query: 231 FFNH 242
           F  H
Sbjct: 251 FAAH 254


>AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB,
           isoform B protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 51  HYLNKYKNKNSYIPVFIAIVSRHIISRFLTKTSYVKMQWLF*PSVYGITSQDLFDHFKPI 230
           HY+N Y   NS   VF  + SR   S    +   +K + L      G++  DL+++F P 
Sbjct: 201 HYVNSYTTGNSLYQVF--VYSRKNYSMIKER---IKSKGL-----NGLSKLDLYNYFAPW 250

Query: 231 FFNH 242
           F  H
Sbjct: 251 FAAH 254


>AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA,
           isoform A protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 51  HYLNKYKNKNSYIPVFIAIVSRHIISRFLTKTSYVKMQWLF*PSVYGITSQDLFDHFKPI 230
           HY+N Y   NS   VF  + SR   S    +   +K + L      G++  DL+++F P 
Sbjct: 201 HYVNSYTTGNSLYQVF--VYSRKNYSMIKER---IKSKGL-----NGLSKLDLYNYFAPW 250

Query: 231 FFNH 242
           F  H
Sbjct: 251 FAAH 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,939,128
Number of Sequences: 53049
Number of extensions: 161285
Number of successful extensions: 247
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 24,988,368
effective HSP length: 71
effective length of database: 21,221,889
effective search space used: 445659669
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)