Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c19
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   4.3  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   4.3  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   4.3  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   5.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.5  

>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = +3

Query: 93  TRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 245
           T+ F+   LLA      D     + +  + + RE++ +MY    + + + G
Sbjct: 132 TKDFINGELLAHLYATGDQASMMEESADEAQKREEMLRMYHACKEALRIIG 182


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +3

Query: 294 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 416
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 229 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 276


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +3

Query: 294 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 416
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 246 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 162 KPTVSKTEIREKLAKMYKVTPDVVFVFGFK 251
           KPT+    I EKL K  K   D V ++ F+
Sbjct: 49  KPTIHFAYIIEKLYKRLKSKGDYVGIYFFR 78


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 360 EKKRPTRKQRKERKNRMKKV 419
           +KK PT+KQ K+ + ++ K+
Sbjct: 402 QKKLPTKKQHKQLQAQLDKL 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,714
Number of Sequences: 2352
Number of extensions: 11101
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)