Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13c11
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.14
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 1.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 2.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 7.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 7.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 9.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 9.5
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +1
Query: 367 HNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKWLETHI 543
HN K ++ R +H + ++ K + R+YR+ + + + R++R + E+ I
Sbjct: 256 HNEKEKFLEERTSHKRYSRSREREQKSYKNEREYRKYRETSKERFRDRRERERSKESKI 314
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + RKYR+ + + R +R +
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRERSKERSRDRTERERS 76
Query: 529 LETHI 543
E I
Sbjct: 77 REPKI 81
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 560 NLFACHICVSNHLWRFC 510
NLF ++ +SN L FC
Sbjct: 88 NLFVINLAISNFLMMFC 104
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEPKI 81
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEPKI 81
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEPKI 81
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEPKI 81
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R K
Sbjct: 239 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKS 298
Query: 529 LETHI 543
E I
Sbjct: 299 KEPKI 303
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.4
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ K + R+YR+ + + R +R +
Sbjct: 250 RRYEKLHNEKEKLLEERTSRERYSRSREREQKSYKNEREYRKYGETSKERSRDRTERERS 309
Query: 529 LETHI 543
E I
Sbjct: 310 KEPKI 314
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.2
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ + R+YR+ + + R++R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEHKI 81
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.2
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ + R+YR+ + + R++R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEHKI 81
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.2
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKW 528
RR HN K ++ R + + ++ + R+YR+ + + R++R K
Sbjct: 17 RRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
Query: 529 LETHI 543
E I
Sbjct: 77 KEHKI 81
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQK---RPSRKYRRRPQNLLDEYNRRQKR 519
RR HN K KL E T + +N+ +++ + R+YR+ + + R +R
Sbjct: 16 RRYEKLHNEKE---KLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRTER 72
Query: 520 HKWLETHIWHAKRFHMIEKWGYRLAY 597
+ E I + + I Y+ Y
Sbjct: 73 ERSREPKIISSLSNNTIHNNNYKYNY 98
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.2
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +1
Query: 349 RRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQK---RPSRKYRRRPQNLLDEYNRRQKR 519
RR HN K KL E T + +N+ +++ + R+YR+ + + R +R
Sbjct: 16 RRYEKLHNEKE---KLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRAER 72
Query: 520 HKWLETHIWHAKRFHMIEKWGYRLAY 597
+ E I + + I Y+ Y
Sbjct: 73 ERSREPKIISSLSNNTIHNNNYKYNY 98
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 9.5
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -1
Query: 192 FCCFHRDSSNKLSLIDLI 139
+C H DSS + +++++
Sbjct: 423 YCAAHTDSSGAMKIVNML 440
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 560 NLFACHICVSNHLWRFC 510
NLF ++ +S+ L FC
Sbjct: 54 NLFVINLAISDFLMMFC 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,011
Number of Sequences: 438
Number of extensions: 3195
Number of successful extensions: 36
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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