Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c06
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000519A48 Cluster: PREDICTED: similar to CG11486-PG...    48   2e-04
UniRef50_Q95RR8 Cluster: LD14901p; n=9; Diptera|Rep: LD14901p - ...    45   0.001
UniRef50_UPI00015B6303 Cluster: PREDICTED: hypothetical protein;...    44   0.004
UniRef50_UPI0000E4681F Cluster: PREDICTED: hypothetical protein;...    36   0.88 
UniRef50_A6R438 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q822P5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_A6LGQ8 Cluster: Glycosyltransferase family 4; n=1; Para...    33   6.2  
UniRef50_UPI0000E2189B Cluster: PREDICTED: hypothetical protein;...    33   8.2  
UniRef50_Q7WA49 Cluster: (3R)-hydroxymyristoyl-[acyl-carrier-pro...    33   8.2  

>UniRef50_UPI0000519A48 Cluster: PREDICTED: similar to CG11486-PG,
           isoform G; n=2; Endopterygota|Rep: PREDICTED: similar to
           CG11486-PG, isoform G - Apis mellifera
          Length = 607

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
 Frame = +3

Query: 336 MDPSIFLPYAPP-NGLPQESKLVTYMSRST---STPTRSLNHAIGKLTLDSSPPGVKKVL 503
           MDPS+F+ Y P  NG+P ESKL TYM+R +   +  T ++   +  L+LDS     KKV 
Sbjct: 1   MDPSMFVTYTPQTNGVPLESKLATYMNRQSPGVTLSTTTITKHLSNLSLDSQ----KKVT 56

Query: 504 VS-EFIP 521
            S EF+P
Sbjct: 57  ASPEFVP 63


>UniRef50_Q95RR8 Cluster: LD14901p; n=9; Diptera|Rep: LD14901p -
           Drosophila melanogaster (Fruit fly)
          Length = 790

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
 Frame = +3

Query: 324 SFEIMDPSIFLP--YAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGV 491
           SFE  D +   P  ++P NG+P ESKL TYM+R + +TP+   LN+    L LDS  P  
Sbjct: 9   SFEFSDTAAMDPIFFSPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLN 66

Query: 492 KKVLVS----EFIP 521
           KK  V+    EFIP
Sbjct: 67  KKSQVTPQSPEFIP 80


>UniRef50_UPI00015B6303 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 676

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
 Frame = +3

Query: 336 MDPSIFLPYAPP-NGLPQESKLVTYMSRST----STPTRSLNHAIGKLTLDSSPPGVKKV 500
           MDPS+F+ Y    NG+P ESKL TYM+R T    +  T ++   +  LTLD+     K  
Sbjct: 64  MDPSMFVAYTTQVNGVPLESKLATYMNRQTPVGVAVNTTNVTKHLSNLTLDAK----KVA 119

Query: 501 LVSEFIP 521
              EF+P
Sbjct: 120 AAPEFLP 126


>UniRef50_UPI0000E4681F Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1041

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 381 PQESKLVTYMSRSTSTPTRSLNHAIGKLTLDSSP 482
           P  S L  ++S+ TSTP  SLNH+ G ++L  +P
Sbjct: 776 PSHSSLTNHISQLTSTPVSSLNHSAGGVSLSLTP 809


>UniRef50_A6R438 Cluster: Putative uncharacterized protein; n=1;
            Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized
            protein - Ajellomyces capsulatus NAm1
          Length = 1182

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 172  KSNPQKSKNYVFHCLKRRGLKAIFIDSFTQNTGAAILIQNSRTLRDGDT 26
            +   +K   Y+ HCL RR LKA+     T +T ++   +N  +   G T
Sbjct: 875  RKTTEKLSAYINHCLSRRALKALLSKGITMSTVSSYFNRNKTSTTSGPT 923


>UniRef50_Q822P5 Cluster: Putative uncharacterized protein; n=1;
           Chlamydophila caviae|Rep: Putative uncharacterized
           protein - Chlamydophila caviae
          Length = 416

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 328 LKLWIHQYFYHTHRLTGFHK 387
           LK W+H Y Y +HR+ GFHK
Sbjct: 359 LKEWMHFYHYDSHRVYGFHK 378


>UniRef50_A6LGQ8 Cluster: Glycosyltransferase family 4; n=1;
           Parabacteroides distasonis ATCC 8503|Rep:
           Glycosyltransferase family 4 - Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 417

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = -3

Query: 605 IRHWYRRWWWTLR*FWGKHIRWRNIVVHRNKFAHQYLLNTW 483
           I+ +Y+  W+ +  ++  H +  NI++H N + H +LLNT+
Sbjct: 75  IKTYYKNIWYLIFPYFSSHSK-ENIILHINYYQHIHLLNTF 114


>UniRef50_UPI0000E2189B Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 353

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 318 HCSFEIMDPSIFLPYAPPNGLPQESKLVTYMSRSTSTPTRSLNHAI 455
           H   +   PS+ LP APP+  P  S   T  SRSTS    S  H +
Sbjct: 143 HLHLQGAPPSLSLPGAPPSPSPPGSTSFTVTSRSTSITFTSREHLL 188


>UniRef50_Q7WA49 Cluster:
           (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
           (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase);
           n=130; Bacteria|Rep:
           (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
           (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase) -
           Bordetella parapertussis
          Length = 151

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -2

Query: 270 FMTMRVPQHVVIKGSISTRHIWKARILY*IRDRNQTLK--NLKTTYFIVSKDGA 115
           F T   P H V+ G +    + +A  L+   D N  LK    KT Y++V  DGA
Sbjct: 45  FFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGA 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,877,263
Number of Sequences: 1657284
Number of extensions: 12635496
Number of successful extensions: 27315
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27291
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)