Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13c06
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    25   2.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.5  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   6.5  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    23   6.5  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   8.7  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 304 CLIYDSFRFTVIHDNESTPTCRY 236
           CL YDSFR  + H     P  R+
Sbjct: 133 CLAYDSFRCYLQHYGNLVPCARF 155


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 406 YVTSFDSCGSPLGGAYGRNIDGSIISK 326
           Y  SF  C SP+ G Y   +DG+ +++
Sbjct: 816 YCVSFSRCRSPVTGTY--FMDGTAVNR 840


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/42 (26%), Positives = 15/42 (35%)
 Frame = +3

Query: 369 PNGLPQESKLVTYMSRSTSTPTRSLNHAIGKLTLDSSPPGVK 494
           P G P  S    YM R+T  P  +  +           PG +
Sbjct: 102 PRGGPGGSNYRRYMPRATGAPVNNFQYCYSTAGTQMGGPGTQ 143


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 254 YPNMSLLRVQFQPDIFGKL 198
           +  M+  R Q +PDIFG+L
Sbjct: 117 FDTMTYYRQQVRPDIFGEL 135


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 596 WYRRWWW 576
           W+ RWWW
Sbjct: 8   WWWRWWW 14


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 384 QESKLVTYMSRSTSTPTRSLN 446
           ++S  V+Y    T TPTR LN
Sbjct: 239 KKSTTVSYQPVPTGTPTRMLN 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,033
Number of Sequences: 2352
Number of extensions: 14645
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)