Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13b10
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 27 0.23
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 25 0.71
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.9
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 5.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 5.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 5.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.7
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 8.7
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 26.6 bits (56), Expect = 0.23
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 134 KNANIHQNIDGQNHYRRNGTRRDGGR 57
+NAN +QN D QN ++NG R++ R
Sbjct: 440 QNAN-NQNADNQNANKQNGNRQNDNR 464
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 134 KNANIHQNIDGQNHYRRNGTRRDGGR 57
+N N QN + QN R+N +R+G R
Sbjct: 495 QNGN-KQNDNKQNGNRQNDNKRNGNR 519
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 25.0 bits (52), Expect = 0.71
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 47 LLEIGHRLCGFRFGGN 94
+LE+GH +CG RF GN
Sbjct: 118 MLELGHEVCG-RFYGN 132
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.2 bits (50), Expect = 1.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 229 VVWVSAACCTIPP 191
+VW+ AAC ++PP
Sbjct: 164 LVWLGAACISLPP 176
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 226 VWVSAACCTIPPSVEARAHSQQPLSFISNSVKMQ 125
VW C + +++ R ++ + +SNSVKMQ
Sbjct: 1521 VWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQ 1554
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 226 VWVSAACCTIPPSVEARAHSQQPLSFISNSVKMQ 125
VW C + +++ R ++ + +SNSVKMQ
Sbjct: 1517 VWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQ 1550
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 399 YNFWQQSALLPHCIDHLAQVARCYIKSFESIYR 301
YN W+ + L +C D L + R ++ ES R
Sbjct: 272 YNTWEPISNLINCSDILEEFERNRLQLLESFKR 304
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 589 SCCMLCRVCPDTRGFGEN-HTTANRRACNKVDSETIYRF 476
+CC +CPD GE+ H N + ++ + +F
Sbjct: 57 ACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDDKF 95
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 589 SCCMLCRVCPDTRGFGEN-HTTANRRACNKVDSETIYRF 476
+CC +CPD GE+ H N + ++ + +F
Sbjct: 62 ACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDDKF 100
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 589 SCCMLCRVCPDTRGFGEN-HTTANRRACNKVDSETIYRF 476
+CC +CPD GE+ H N + ++ + +F
Sbjct: 62 ACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDDKF 100
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.7
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = -3
Query: 229 VVWVSAACCTIPPSVE 182
V+W+ A C +P +++
Sbjct: 177 VIWLLALCLAVPQAIQ 192
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 360 CNGATRQTVARNYRS*RR 413
C TRQ + +YRS RR
Sbjct: 121 CENETRQGLTLHYRSKRR 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,493
Number of Sequences: 438
Number of extensions: 4642
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -