Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13b06
(396 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41460 Cluster: Uncharacterized 9.9 kDa protein in LEF8... 177 6e-44
UniRef50_O10314 Cluster: Uncharacterized 9.7 kDa protein; n=6; N... 85 4e-16
UniRef50_P41459 Cluster: Uncharacterized 8.2 kDa protein in LEF8... 80 1e-14
UniRef50_O10313 Cluster: Uncharacterized 8.0 kDa protein; n=3; N... 56 2e-07
UniRef50_Q287G0 Cluster: ORF-112; n=9; Nucleopolyhedrovirus|Rep:... 38 0.071
UniRef50_Q1HH03 Cluster: Putative uncharacterized protein; n=1; ... 38 0.093
UniRef50_Q01778 Cluster: Protein hunchback; n=6; Musca domestica... 37 0.12
UniRef50_Q0N459 Cluster: Ac55-like protein; n=1; Clanis bilineat... 36 0.22
UniRef50_P05084 Cluster: Protein hunchback; n=64; Schizophora|Re... 36 0.22
UniRef50_Q80LQ5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.38
UniRef50_Q7RQD4 Cluster: Putative uncharacterized protein PY0116... 35 0.50
UniRef50_Q9J834 Cluster: ORF103; n=1; Spodoptera exigua MNPV|Rep... 34 0.87
UniRef50_Q7RL27 Cluster: Putative uncharacterized protein PY0272... 34 0.87
UniRef50_Q99GZ8 Cluster: ORF50; n=3; Nucleopolyhedrovirus|Rep: O... 34 1.1
UniRef50_Q287G1 Cluster: ORF-111; n=1; Agrotis segetum nucleopol... 34 1.1
UniRef50_Q7QSH0 Cluster: GLP_64_21895_22647; n=1; Giardia lambli... 34 1.1
UniRef50_Q7RIX4 Cluster: Phosphatase; n=5; Plasmodium (Vinckeia)... 33 1.5
UniRef50_Q462C1 Cluster: Orf44; n=1; Trichoplusia ni SNPV|Rep: O... 33 2.0
UniRef50_UPI00015B4493 Cluster: PREDICTED: hypothetical protein;... 33 2.7
UniRef50_Q8JM24 Cluster: Putative uncharacterized protein; n=2; ... 33 2.7
UniRef50_Q462C2 Cluster: Orf43; n=2; Nucleopolyhedrovirus|Rep: O... 33 2.7
UniRef50_Q91BH5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_Q80LQ6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_Q0IL54 Cluster: ORF65; n=1; Leucania separata nuclear p... 32 4.6
UniRef50_Q9U4H9 Cluster: CES-1; n=3; Caenorhabditis|Rep: CES-1 -... 32 4.6
UniRef50_A0EAR3 Cluster: Chromosome undetermined scaffold_86, wh... 32 4.6
UniRef50_Q74ML2 Cluster: NEQ108; n=1; Nanoarchaeum equitans|Rep:... 32 4.6
UniRef50_Q75WT1 Cluster: Hunchback; n=1; Gryllus bimaculatus|Rep... 31 6.1
UniRef50_Q23BX2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_Q93N40 Cluster: Transport protein permease; n=4; Coxiel... 31 8.1
UniRef50_Q15PP6 Cluster: Poly(Beta-D-mannuronate) lyase precurso... 31 8.1
>UniRef50_P41460 Cluster: Uncharacterized 9.9 kDa protein in LEF8-FP
intergenic region; n=5; Nucleopolyhedrovirus|Rep:
Uncharacterized 9.9 kDa protein in LEF8-FP intergenic
region - Autographa californica nuclear polyhedrosis
virus (AcMNPV)
Length = 84
Score = 177 bits (431), Expect = 6e-44
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = +1
Query: 115 MLRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPN 294
MLRSI+RRFKSTNNLSKKPSD+YVVLCPKCYFVTS+EVSVAEYIEMHKNFNTKFADRCPN
Sbjct: 1 MLRSIMRRFKSTNNLSKKPSDYYVVLCPKCYFVTSAEVSVAEYIEMHKNFNTKFADRCPN 60
Query: 295 DFIVINSKSWNNHENCSALFYPV 363
DFIV NSKSWNNHENCSALFYP+
Sbjct: 61 DFIVTNSKSWNNHENCSALFYPL 83
>UniRef50_O10314 Cluster: Uncharacterized 9.7 kDa protein; n=6;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 82
Score = 85.4 bits (202), Expect = 4e-16
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +1
Query: 115 MLRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPN 294
MLR++ RRFK + ++ + VVLCP+CYFV +SVA+Y MH FN +FAD C N
Sbjct: 1 MLRALRRRFKPAGDERRREEN--VVLCPRCYFVAPGSISVADYTRMHIKFNEQFADECSN 58
Query: 295 DFIVINSKSWNNHENCSALFY 357
+ V K+W N+ NC L+Y
Sbjct: 59 NLAVTQPKTWFNYTNCPLLYY 79
>UniRef50_P41459 Cluster: Uncharacterized 8.2 kDa protein in LEF8-FP
intergenic region; n=9; Nucleopolyhedrovirus|Rep:
Uncharacterized 8.2 kDa protein in LEF8-FP intergenic
region - Autographa californica nuclear polyhedrosis
virus (AcMNPV)
Length = 73
Score = 80.2 bits (189), Expect = 1e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 3 SEYYKTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY 110
SEYYKTFEANKVGQHTTYDVVGKRDY KFDKLVKKY
Sbjct: 38 SEYYKTFEANKVGQHTTYDVVGKRDYTKFDKLVKKY 73
>UniRef50_O10313 Cluster: Uncharacterized 8.0 kDa protein; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 8.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 68
Score = 56.4 bits (130), Expect = 2e-07
Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +3
Query: 6 EYYKTFEANKVGQHT-TYDVVGKRDYNKFDKLVKK 107
EYYKTFE+ + GQH+ TYDVVGKRDY DKLVKK
Sbjct: 33 EYYKTFESIRAGQHSSTYDVVGKRDYTVVDKLVKK 67
>UniRef50_Q287G0 Cluster: ORF-112; n=9; Nucleopolyhedrovirus|Rep:
ORF-112 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 69
Score = 37.9 bits (84), Expect = 0.071
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 EANKVGQHTTYDVVGKRDYNK-FDKLVKKY 110
+A++VG+ TTYDVVGKRDY FD+ KKY
Sbjct: 40 DASRVGRSTTYDVVGKRDYKTLFDE--KKY 67
>UniRef50_Q1HH03 Cluster: Putative uncharacterized protein; n=1;
Antheraea pernyi nucleopolyhedrovirus|Rep: Putative
uncharacterized protein - Antheraea pernyi nuclear
polyhedrosis virus (ApNPV)
Length = 143
Score = 37.5 bits (83), Expect = 0.093
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 122 RNMSIFFHQFVKFIVISLADHVVRSVLAHFICFKSFVIF 6
R+M FF Q V F +++ A H VR +L + K F+IF
Sbjct: 35 RSMLAFFDQLVHFAIVAFAHHAVRGLLPDAVGLKRFIIF 73
>UniRef50_Q01778 Cluster: Protein hunchback; n=6; Musca
domestica|Rep: Protein hunchback - Musca domestica
(House fly)
Length = 817
Score = 37.1 bits (82), Expect = 0.12
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 357
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 315 ILQCPKCPFVTELKHHLEYHIRKHKNLKPFQCDKC--SYSCVNKSMLNSHRKSHSSVY 370
>UniRef50_Q0N459 Cluster: Ac55-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac55-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 77
Score = 36.3 bits (80), Expect = 0.22
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = +3
Query: 3 SEYYKTFEAN--KVGQHTTYDVVGKRDYNK 86
+ +YK +E + KVG+ TTY+VVG+RDY K
Sbjct: 39 ASFYKQYEEDTGKVGRMTTYNVVGQRDYKK 68
>UniRef50_P05084 Cluster: Protein hunchback; n=64; Schizophora|Rep:
Protein hunchback - Drosophila melanogaster (Fruit fly)
Length = 758
Score = 36.3 bits (80), Expect = 0.22
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 357
++ CPKC FVT + + +I HKN D+C + +N N+H + Y
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSHRKSHSSVY 323
>UniRef50_Q80LQ5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 93
Score = 35.5 bits (78), Expect = 0.38
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 6 EYYKTFEANKVGQHTTYDVVGKRDY 80
E YK + +VG+ TTYD++GKRDY
Sbjct: 58 ENYKAEDKLRVGRCTTYDIIGKRDY 82
>UniRef50_Q7RQD4 Cluster: Putative uncharacterized protein PY01166;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01166 - Plasmodium yoelii yoelii
Length = 786
Score = 35.1 bits (77), Expect = 0.50
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +3
Query: 15 KTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY*HVAINHTTFQEYKQSQQKAFRSLCSVM 194
K F N ++ Y ++ K +Y+K + K H +++ + E+K+++QK F+S
Sbjct: 318 KNFRKNAFKKNIPYIIISKFNYHKLETKYLKA-HQTVDYEKYAEWKENKQKNFKSDGDTN 376
Query: 195 SKVL 206
S+V+
Sbjct: 377 SRVI 380
>UniRef50_Q9J834 Cluster: ORF103; n=1; Spodoptera exigua MNPV|Rep:
ORF103 - Spodoptera exigua MNPV
Length = 93
Score = 34.3 bits (75), Expect = 0.87
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 97 W*KNIDMLRSIIRRFKSTNNLSKKPSDHY--VVLCPKCYFVTSSEVSVAEYIEMHKNFNT 270
W K L S + S + + + DH+ VV C KC FV +S YI +HK +N
Sbjct: 3 WAKGTTSL-STTKENTSFEDSAPRRVDHHNQVVYCQKCKFVAPMSLSFENYIRLHKLYNQ 61
Query: 271 KFADRC 288
C
Sbjct: 62 IINGTC 67
>UniRef50_Q7RL27 Cluster: Putative uncharacterized protein PY02720;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY02720 - Plasmodium yoelii
yoelii
Length = 246
Score = 34.3 bits (75), Expect = 0.87
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 118 LRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPND 297
+++II K NNL KPS +++LC F+ S ++ + + + N F R
Sbjct: 164 VKNIINEKKQNNNLFIKPSQLHIILC----FIPSVHFTIRSTLPLLVSDNVSFLFRIDPH 219
Query: 298 FIVINSKSWNN 330
IN +S+N+
Sbjct: 220 HFSINHESFND 230
>UniRef50_Q99GZ8 Cluster: ORF50; n=3; Nucleopolyhedrovirus|Rep:
ORF50 - Helicoverpa zea SNPV
Length = 64
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 172 SDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPND 297
+++ VV C KC FV +S E++ +H+ FN R +D
Sbjct: 19 TENSVVRCVKCLFVAPMSISFEEFLYLHRIFNQAVNTRVAHD 60
>UniRef50_Q287G1 Cluster: ORF-111; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: ORF-111 - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 77
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSK 318
VV C KC F+ +S EY +H+ +N + C I N +
Sbjct: 21 VVYCEKCDFIAPLSLSFEEYTSLHRRYNNIIENVCVTTLISSNCR 65
>UniRef50_Q7QSH0 Cluster: GLP_64_21895_22647; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_21895_22647 - Giardia lamblia
ATCC 50803
Length = 250
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 157 LSKKPSDHYVVLCPKCYFVTSSEVSVAE 240
L++KPSDH VVLC C F SS+ + AE
Sbjct: 117 LARKPSDHSVVLCASCGF-QSSDAAFAE 143
>UniRef50_Q7RIX4 Cluster: Phosphatase; n=5; Plasmodium
(Vinckeia)|Rep: Phosphatase - Plasmodium yoelii yoelii
Length = 491
Score = 33.5 bits (73), Expect = 1.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 69 KRDYNKFDKLVKKY*HVAIN----HTTFQEY-KQSQQKAFRSLCSVMSKVLF 209
K DYNK DK++K Y + IN H + +Y S +R++ + ++K+ F
Sbjct: 286 KNDYNKLDKIIKIYHNNCINLENTHDKYMDYIYNSNSSIYRNIYTKLNKIYF 337
>UniRef50_Q462C1 Cluster: Orf44; n=1; Trichoplusia ni SNPV|Rep:
Orf44 - Trichoplusia ni SNPV
Length = 129
Score = 33.1 bits (72), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKS 321
+V C C FV VS +I +H+ +N R P + + N+ S
Sbjct: 59 IVYCSNCNFVAPMSVSYEHFIWLHEKYNCMVNSRGPCAYTISNTNS 104
>UniRef50_UPI00015B4493 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 561
Score = 32.7 bits (71), Expect = 2.7
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 103 KNIDMLRSIIRRFKSTN-NLSKKPS-DHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKF 276
K+ D ++ I F +TN NL K H + C +C + + E++ F K
Sbjct: 311 KDDDFVKCSICDFLTTNKNLYKHIKYQHTAIDCQRCGTKLENSTKLEEHLRNECVFRDKA 370
Query: 277 ADRCPNDFIVINSKSWNNH 333
RCP ++ K++N H
Sbjct: 371 TIRCPTCNTLLKRKNFNKH 389
>UniRef50_Q8JM24 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 89
Score = 32.7 bits (71), Expect = 2.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFN 267
+V C +C FV+ VS EY +H+ FN
Sbjct: 34 IVYCEECGFVSPMSVSFEEYTRLHRRFN 61
>UniRef50_Q462C2 Cluster: Orf43; n=2; Nucleopolyhedrovirus|Rep:
Orf43 - Trichoplusia ni SNPV
Length = 91
Score = 32.7 bits (71), Expect = 2.7
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Frame = +3
Query: 3 SEYYKTFEANK--VGQHTTYDVVGKRDYNK-FDKLVKKY 110
+++Y +A+ VG++TTY+VVG+R+Y K FD+ K+
Sbjct: 53 ADFYSKHKADVAYVGRNTTYNVVGQRNYGKYFDEKTYKF 91
>UniRef50_Q91BH5 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 71
Score = 31.9 bits (69), Expect = 4.6
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 15 KTFEANKVGQHTTYDVVGKRDY-NKFD 92
K A ++G+ TTYD+VG+R+Y N +D
Sbjct: 39 KLIRAEEIGRFTTYDIVGERNYQNIYD 65
>UniRef50_Q80LQ6 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 86
Score = 31.9 bits (69), Expect = 4.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRC 288
+V C C FV +S +YI +H FN +C
Sbjct: 24 IVRCLHCSFVAPMSISYEDYIRLHDLFNVLIKQKC 58
>UniRef50_Q0IL54 Cluster: ORF65; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF65 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 91
Score = 31.9 bits (69), Expect = 4.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 27 ANKVGQHTTYDVVGKRDYNKF 89
AN +G+ TTYDV+G+R+Y F
Sbjct: 63 ANHIGRVTTYDVLGQRNYQTF 83
>UniRef50_Q9U4H9 Cluster: CES-1; n=3; Caenorhabditis|Rep: CES-1 -
Caenorhabditis briggsae
Length = 266
Score = 31.9 bits (69), Expect = 4.6
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 109 IDMLRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRC 288
+D L+SI RR + NLS + +C KC ++ +++ + + H+ ++ A +C
Sbjct: 106 LDSLQSIDRRSLNKKNLSSSSQNR--CVCDKCGKSYATTSNLSRHKQTHRALDSPHAKQC 163
Query: 289 PN-DFIVINSKSWNNH 333
P+ D + ++ + + H
Sbjct: 164 PHCDRVYVSMPALSMH 179
>UniRef50_A0EAR3 Cluster: Chromosome undetermined scaffold_86, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_86,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1319
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 15 KTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY*HVAINHTTFQEYKQSQ 161
++F +NK+ + + K DY++F+ + Y + +H TFQ+Y + Q
Sbjct: 762 ESFVSNKISSNNHENSFAKDDYDEFENKFRTY-LLDQHHKTFQQYNEEQ 809
>UniRef50_Q74ML2 Cluster: NEQ108; n=1; Nanoarchaeum equitans|Rep:
NEQ108 - Nanoarchaeum equitans
Length = 352
Score = 31.9 bits (69), Expect = 4.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 KSTNNLSKKPSD-HYVVLCPKCYFVTSSEVSVAEY 243
K +N + K S Y+ CPKCY+++ SE SV Y
Sbjct: 213 KGSNRIEKLKSQIGYLYYCPKCYYISESE-SVCPY 246
>UniRef50_Q75WT1 Cluster: Hunchback; n=1; Gryllus bimaculatus|Rep:
Hunchback - Gryllus bimaculatus (Two-spotted cricket)
Length = 374
Score = 31.5 bits (68), Expect = 6.1
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 184 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHENCSALFY 357
++ CP+C FVT + + ++ H D+CP + +N N+H + Y
Sbjct: 167 MLTCPRCPFVTEYKHRLEYHLRNHSGSKPFKCDKCP--YTCVNKSMLNSHMKSHSSVY 222
>UniRef50_Q23BX2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1318
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 232 VAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHEN 339
V + I++ K+F KF ++C N FI + K N N
Sbjct: 1250 VLKKIQIQKDFTQKFEEQCSNIFIFVKQKLQNQKNN 1285
>UniRef50_Q93N40 Cluster: Transport protein permease; n=4; Coxiella
burnetii|Rep: Transport protein permease - Coxiella
burnetii
Length = 287
Score = 31.1 bits (67), Expect = 8.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 131 MIDRNMSIFFHQFVKFIVISLADHV 57
++ RN+ +FFH FV F+ ++L H+
Sbjct: 137 VVSRNVMVFFHHFVVFLTVALIFHL 161
>UniRef50_Q15PP6 Cluster: Poly(Beta-D-mannuronate) lyase precursor;
n=1; Pseudoalteromonas atlantica T6c|Rep:
Poly(Beta-D-mannuronate) lyase precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 756
Score = 31.1 bits (67), Expect = 8.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 211 VTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNHE 336
+T S++S A +E K FN + P D IV+ + SWN+ E
Sbjct: 29 LTFSQLSHAALVENIKQFNDAVSSVKPGDEIVLANGSWNDVE 70
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,906,066
Number of Sequences: 1657284
Number of extensions: 6384606
Number of successful extensions: 17420
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 16902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17417
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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