Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13b01
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    28   0.25 
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   7.2  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   9.5  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   9.5  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   9.5  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   9.5  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   9.5  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 530 MPYGLANAPVVYQRVISKTLK-PLIDAGKVITYVDDVLILS 649
           +P G    P ++  +    L+ PL D  KVI Y DD+++L+
Sbjct: 645 VPQGSILGPTLWNVMYDGVLRIPLPDEAKVIGYADDLVVLA 685


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 SITVKERFPLPRIDDHIDKLGKYIFFTSLDMATGFHQLPLKDDAS 478
           S+T+  +FPL +I    D+ G   FF S    TG    P    AS
Sbjct: 59  SLTIMHQFPLHKISYCADEKGVKKFF-SFIAKTGTGATPTSSIAS 102


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 SITVKERFPLPRIDDHIDKLGKYIFFTSLDMATGFHQLPLKDDAS 478
           S+T+  +FPL +I    D+ G   FF S    TG    P    AS
Sbjct: 59  SLTIMHQFPLHKISYCADEKGVKKFF-SFIAKTGTGVTPTSSIAS 102


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 SITVKERFPLPRIDDHIDKLGKYIFFTSLDMATGFHQLPLKDDAS 478
           S+T+  +FPL +I    D+ G   FF S    TG    P    AS
Sbjct: 59  SLTIMHQFPLHKISYCADEKGVKKFF-SFIAKTGTGVTPTSSIAS 102


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 SITVKERFPLPRIDDHIDKLGKYIFFTSLDMATGFHQLPLKDDAS 478
           S+T+  +FPL +I    D+ G   FF S    TG    P    AS
Sbjct: 59  SLTIMHQFPLHKISYCADEKGVKKFF-SFIAKTGTGVTPTSSIAS 102


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 SITVKERFPLPRIDDHIDKLGKYIFFTSLDMATGFHQLPLKDDAS 478
           S+T+  +FPL +I    D+ G   FF S    TG    P    AS
Sbjct: 59  SLTIMHQFPLHKISYCADEKGVKKFF-SFIAKTGTGVTPTSSIAS 102


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +1

Query: 523 PENALRTRQCSRCISKGYI 579
           P+ +  +R+C RC+ +G++
Sbjct: 227 PKPSAESRRCFRCLERGHM 245


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,766
Number of Sequences: 2352
Number of extensions: 14479
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)